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Domain assignment for Q3IP08 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q3IP08
Domain Number 1 Region: 7-89
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 3.16e-22
Family Transcription factor E/IIe-alpha, N-terminal domain 0.002
Further Details:      
 
Weak hits

Sequence:  Q3IP08
Domain Number - Region: 116-147
Classification Level Classification E-value
Superfamily RNA polymerase subunits 0.000732
Family RBP12 subunit of RNA polymerase II 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Q3IP08
Sequence length 175
Comment (sp|Q3IP08|TFE_NATPD) Transcription initiation factor TFIIE {ECO:0000255|HAMAP-Rule:MF_01909} KW=Complete proteome; Reference proteome OX=348780 OS=NBRC 14720 / NCIMB 2260 / Gabara) (Halobacterium pharaonis). GN=NP_4106A; OC=Natronomonas.
Sequence
MAFEDLLNDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFQYENIPEQLEEEMHRLLEALENRRQYESENEFYLCG
ECQLRFEFDEAMEFGFECPECGGRLESMENDRLVNAMEQHIEALRDELHVETAEA
Download sequence
Identical sequences Q3IP08
WP_011323760.1.57290 348780.NP4106A gi|76802687|ref|YP_330782.1|

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