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Domain assignment for Q56FN1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q56FN1
Domain Number 1 Region: 118-256
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 2.83e-61
Family Viral cysteine protease of trypsin fold 0.0001
Further Details:      
 
Domain Number 2 Region: 4-104
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 5.6e-36
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0000112
Further Details:      
 
Domain Number 3 Region: 450-630
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000519
Family Nucleotide and nucleoside kinases 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Q56FN1
Sequence length 692
Comment (tr|Q56FN1|Q56FN1_9ENTO) Polyprotein {ECO:0000313|EMBL:AAX63468.2} OX=12062 OS=Echovirus E6. GN= OC=Picornavirales; Picornaviridae; Enterovirus; Enterovirus B.
Sequence
MLHPGMSIPFMSVGNAYSNFYDGWSHFSQTGVYGFNTLNNMGKLYFRHVNDKTISPITSK
VRIYFKPTQVEARVPRPPRLCEYTHKDNVDFEPKGVTTSRTQLTISNSTHMENYGAFGQQ
SGAVYVGNYRLVNRHLATHNDWKNCVWEDYNRDLLVSTTTAHGCDTIARCQCTTGVYFCQ
SKKKHYPVSFEGPGLVEVQESEYYPKRYQSHVLLAVGFSEPGDCGGILRCEHGVIGIVTM
GGEGVVGFADVRDLLWLEDDAMEQGVKDYVEQLGNAFGSGFTNQISEQVNLLKESLVGQD
SILEKSLKALVKIISALVIVVRNHDDLITVTATLALIGCTTSPWRWLKHKVSQYYGIPMA
ERQNNNWLKKFTEMTNACKGMEWIAIKIQKFIEWLKIKILPEVKEKHEFLNRLKQLPLLE
SQIATIEQSAPSQSDQEQLFSNVQYFAHYCRKYAPLYAAEAKRVFSLEKKMSNYIQFKSK
CRIEPVCLLLHGCPGAGKSVATNLIGRSLAEKLNSSVYSLPPDPDHFDGYKQQAVVIMDD
LCQNPDGKDVSLFCQMVSSVDFVPPMAALEEKGILFTSPFVLASTNAGSINAPTVSDSRA
LARRFHXDMNIEVISMYSQNGKINMPMSVKTCDEECCPTNFKKCCPLVCGKAIQFIDRRT
QVRYSLDMLVTEMFREYNHRHTVGATLEALFQ
Download sequence
Identical sequences Q56FN1
Q56FN1_9ENTO

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