SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Q59HI6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Q59HI6
Domain Number 1 Region: 636-785
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 1.44e-47
Family Toll/Interleukin receptor TIR domain 0.000000124
Further Details:      
 
Domain Number 2 Region: 331-587
Classification Level Classification E-value
Superfamily L domain-like 4.42e-30
Family Ngr ectodomain-like 0.023
Further Details:      
 
Domain Number 3 Region: 32-239
Classification Level Classification E-value
Superfamily L domain-like 4.12e-22
Family Ngr ectodomain-like 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Q59HI6
Sequence length 796
Comment (tr|Q59HI6|Q59HI6_PIG) Toll-like receptor 6 {ECO:0000313|EMBL:BAD91801.1} KW=Complete proteome; Reference proteome OX=9823 OS=Sus scrofa (Pig). GN=TLR6 OC=Sus.
Sequence
MSKDKEPTVISLHSVYVMTLVWGTLIQFSEESEFVVDKSKIGLTRVPKDLPPQTKVLDVS
QNFITELHLSDISFLSQLTVLRLSQNRMQCLDISVFKFNQDLEYLDLSHNQLQTILCHPI
TSLKHLDLSFNDFEALPICKEFGNLTQLNFLGLSATKLQQLDLLPIAHLHLSCILLDLER
YYMKENEKESLQILNTKKLHLVFHPNSFFSVQVNISVKSVGCLQLANIKLSDDNCQVFIT
FLLELTQGPTLLNFTLNHVETTWKCLVGIFQFLWPKPVEYLSIYNLTIVESIDEEDFIYY
ETTLKGVKIEHITKRVFIFSQTALYRVFSDMNIRMLTIADTHFIHMLCPQVPSTFNFLNF
TQNVFTDSVFQNCKTLARLETLILQKNKLEDLFKISLMTKDMLSLEILDVSSNSLEYDRH
GENCTWVGSIVVLNLSSNILTDSVFRCLPPRIKVLDLHSNRIRSIPKDVAHLEALQELNV
ASNSLAHLPGCGSFSSLSILTIDYNSISNPSADFFQSCQKIRSLKAGNNPFQCTCELRDF
IQSLGQVSSDVVESWPDSYECEYPESYKGTLLKDFRVSELSCNTALLIVTIGVTGLALAL
TMTGLCVYFDLPWYLRMLCQWTQTRRRARNVPLEELQRTLQFHAFISYSEHDSAWVKNEL
VPCLEKEGIKICLHERNFVPGKSIMENIINCIEKSYKSIFVLSPNFVQSEWCHYELYFAH
HNLFHEGSDNLILILLDPIPQNSIPGKYHKLKALMAQRTYLEWPKEKSKHGLFWANIRAA
FNIKLKLVAEEDDVKT
Download sequence
Identical sequences Q59HI6
NP_998925.2.46622 9823.ENSSSCP00000009355 9823.ENSSSCP00000009362 ENSSSCP00000021244 ENSSSCP00000021244

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]