SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Q6DUE9 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Q6DUE9
Domain Number 1 Region: 1741-2164
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.33e-103
Family RNA-dependent RNA-polymerase 0.00000493
Further Details:      
 
Domain Number 2 Region: 2-247
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 7.39e-50
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0067
Further Details:      
 
Domain Number 3 Region: 250-489
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 8.58e-49
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0021
Further Details:      
 
Domain Number 4 Region: 1523-1733
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.81e-42
Family Viral cysteine protease of trypsin fold 0.0000000035
Further Details:      
 
Domain Number 5 Region: 508-777
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 3.68e-35
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0024
Further Details:      
 
Domain Number 6 Region: 1218-1371
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000955
Family Phosphoribulokinase/pantothenate kinase 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Q6DUE9
Sequence length 2165
Comment (tr|Q6DUE9|Q6DUE9_9PICO) Genome polyprotein {ECO:0000256|SAAS:SAAS00958788} OX=12092 OS=Hepatovirus A. GN= OC=Picornavirales; Picornaviridae; Hepatovirus.
Sequence
MNMSRQGIFQTVGSGLDHILSLADVEEEQMIQSVDRTAVTGASYFTSVDQSSVHTAEVGS
HQPEPLKTSVDKPGSKRTQGEKFFLIHSADWLTTHALFHEVAKLDVVKLLYNEQFAVQGL
LRYHTYARFGIEIQVQINPTPFQQGGLICAMVPGDQSYGSIASLTVYPHGLLNCNINNVV
RIKVPFIYTRGAYHFKDPQYPVWELTIRVWSELNIGTGTSAYTSLNVLARFTDLELHGLT
PLSTQMMRNEFRVSTTENVVNLSNYEDARAKMSFALDQEDWKSDASQGGGIKITHFTTWT
SIPTLAAQFPFNASDSVGQQIKVIPVDPYFFQMTNTNPEQKCITALASICQMFCFWRGDL
VFDFQVFPTKYHSGRLLFCFVPGNELIDVSHITLKQATTAPCAVMDITGVQSTLRFRVPW
ISDTPYRVNRYTKSSHQKGEYTAIGKLIVYCYNRLTSPSNVASHVRVNVYLSAINLECFA
PLYHAMDVTTQVGDDSGGFSTTVSTKQNVPDPQVGITTVKDLKGRANQGKMDISGVQAPV
GAITTIEDPVLAKKVPETFPELKPGESRHTSDHMSIYKFMGRSHFLCTFTFNSNNKEYTF
PITLSSTSNPPHGLPSTLRWFFNLFQLYRGPLDLTIIITGATDVDGMAWFTPVGLAVDTP
WVEKESALSIDYKTALGAVRFNTRRTGNIQIRVPWASYPYAVSGALDGLGDKTDSTFGLV
SIQIANYNHSDEYLSFSCYLSVTEQSEFYFPRAPLNTNAMMSSETMMDRIALGDLESSVD
DPRSEEDRKFESHIEKRKPYKELRLEVGKQRLKYAQEELSNEVLPPPRKIKGVFSQAKIS
LFYTEDHEIMKFSWKGITADTRALRRFGFSLAAGRSVWTLEMDAGVLTGRLVRVNDEKWT
EMKDDKIVSLVEKFTSNKHWSKVNFPHGMLDLEEIAANAKEFPNMSETDLCFLLHWLNPK
KINLADRMLGLSGIQEIKEKGVGLIGECRAFLDSITSTLKSMMFGFHHSVTVEIINTVLC
FVKSGILLYVIQQLNQEEHSHIIGLLRVMNYADIGCSVISCGKVFSKMLETVFNWQMDSR
MMELRTQSISNWLRDICSGITIFKSFKDAIYWLYTKIREYYDLNYGNKKDVLNILKDHQQ
KIERAIEEADNFCVLQIQDVEKFEQYQKGVDLIQKLRTVHSMAQVDPGLTVHLAPLRDCI
ARVHQKLKNLGSINQAMVTRCEPVVCYLYGKRGGGKSLTSIALATKICKHYGVEPEKNIY
TKPVASDYWDGYSGQLVCIIDDIGQNTTDEDWSDFCQLVSGCPMRLNMASLEEKGRHFSS
PFIIATSNWSNPSPKTVYVKEAIDRRLHFKVEVKPASFFKNPHNDMLNVNLAKTNDAIKD
MSCVDLVMDNHNVSLSELLSSLVMTVEIRKQNMSEFMELWSQGLSDDDNDSAVAEFFQSF
PSGEPSGSRLSQFFQSVTNHKWVAVGAAVGVLGVLVGGWYVYKHFTKKQEESIPSEGVYH
GVTKPKQVIKLDADPVESQSTLEIAGLVRKNLVQFGVGEKNGCVRWVMNALGIKDDWLLV
PSHAYKFEKDYEMMEFYFNRGGTYYSISAGNVVIQSLDVGFQDVVLMKVPTIPKFRDITE
HFIKKSDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYVHKKNDGTTIDLTVDQAW
RGKGEGLPGMCGGALISSNQSIQNAILGIHVAGGNSILVAKLVTQEMFQNIDKKIVESQR
IMKVEFTQCSMNVVSKTLFRKSPIHHHIDKNMINFPAVMPFSRAEIDPMAVMLSKYSLPI
VDEPDDYKDVSVFFQNKILGKSPLVDDFLDIEMAITGAPGIDAINMDSSPGYPYVQEKLT
KRDLIWLDDNGMFLGLHPRLAQRILFNTTMMENCSDLDVVFTTCPKDELRPLDKVLESKT
RAIDSCPLDYTILCRMYWGPAISYFHLNPGFHTGVAIGIDPDRQWDQLFKTMIRFGDVGL
DLDFSAFDASLSPFMIREAGRILTEMSGAPVHFGEALINTIIYSKHLLYNCCYHVCGSMP
SGSPCTALLNSIINNVNLYYVFSKIFKKSPVFFCDAVRILCYGDDVLIVFSRQVQIDNLD
SIGQRIVDEFKKLGMTATSADKSVPQLKPVSELTFLKRSFNLVEDRIRPAIAEKTIWSLV
AWQRN
Download sequence
Identical sequences Q6DUE9
Q6DUE9_9PICO

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]