SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Q6MCE2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Q6MCE2
Domain Number 1 Region: 348-541
Classification Level Classification E-value
Superfamily RNI-like 1.44e-48
Family 28-residue LRR 0.059
Further Details:      
 
Domain Number 2 Region: 519-641
Classification Level Classification E-value
Superfamily RNI-like 1.26e-28
Family 28-residue LRR 0.015
Further Details:      
 
Domain Number 3 Region: 227-410
Classification Level Classification E-value
Superfamily L domain-like 1.47e-27
Family Internalin LRR domain 0.016
Further Details:      
 
Domain Number 4 Region: 84-159
Classification Level Classification E-value
Superfamily POZ domain 0.0000022
Family BTB/POZ domain 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Q6MCE2
Sequence length 662
Comment (tr|Q6MCE2|Q6MCE2_PARUW) Uncharacterized protein {ECO:0000313|EMBL:CAF23757.1} KW=Complete proteome; Reference proteome OX=264201 OS=Protochlamydia amoebophila (strain UWE25). GN=pc1033 OC=Candidatus Protochlamydia.
Sequence
MNISNFGLNSSYLVNTTNPSYYPLQDINDQLENENTPLDNPLPNLEETSASTIQPSTLSP
SSEEVQLSFHEGTSLTISPSQLALLREKSLYFKTLWSGNFQETLQHPLDLTKKDFTLLLN
FLMDANFKVPLEEIISAIQLTDYYELTEVVKNLEKQLMEEYKSQRFEPFNSTEESLVRLK
EILSFAQRCQLNTLKNYLEFTVVSELLNKAFLSDEFGRIINHFSNEIKILNLPNKILNNA
CFLALKSCENLKVLHFKECRHLTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTA
LQYLNLSEYKNLTDAGLAHLTPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQ
NLTDAGLAHLTPLTGLQHLNLSRCNKLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHL
TPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQHLN
LSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLTDA
GLVHLKLLTGLQHLNLSNCKNLTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTA
LQHLDLRYCQNLTDAGLAHLTPLTGLRHLDLSQCWRLTKAGLARFKTLAASLNLEIRLGS
FP
Download sequence
Identical sequences Q6MCE2
264201.pc1033 WP_011175583.1.90613 gi|46446667|ref|YP_008032.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]