SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Q8K259 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Q8K259
Domain Number 1 Region: 134-286
Classification Level Classification E-value
Superfamily Ribonuclease H-like 6.07e-20
Family Retroviral integrase, catalytic domain 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Q8K259
Sequence length 518
Comment (sp|Q8K259|GIN1_MOUSE) Zinc finger H2C2 domain-containing protein KW=Complete proteome; Reference proteome OX=10090 OS=Mus musculus (Mouse). GN=Gin1; OC=Muroidea; Muridae; Murinae; Mus; Mus.
Sequence
MVRSGKNGDLHLKQIAYYKRTGEYHPTTLPSERSGIRRAAKKFVFKEKKLFYVGKDRKQN
RLVVVSEEEKKKVLRECHENGPGVHHGISRTLTLVESGYYWTSVTNDVKQWVYACQHCQV
AKNTVIVAPQQHLPMVGNPWSVVTVDLMGPFHTSNRSHVYAIIMTDLFTKWVMILPLCDV
SASEISKAIINIFFLYGPPQKIIMDQRDEFIEQINVELYRLFGAKEIVISRASGSVNPAE
NTPSTIKTFLSKHCADHPNSWDEHLPALSFAFNVTHLEPNKNTPYFQMFNRNPCVLECPP
EEGSEGTSVFARIVAAIREADGVVENKTPASSQMENNNSDELSKSKVVKKKAKQLNPFHL
KVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDNTGTRLKRPIKMSHLRPY
VRESSEQDSLYLLQGSIVADHDYIGLPEIPVGTYQANILVEDATIGIADNELLISSKDHE
LLEYRNSKISALVEDHSSLEKQTFSLLDSSNQVLEYLS
Download sequence
Identical sequences Q8K259
ENSMUSP00000027571 ENSMUSP00000108464 10090.ENSMUSP00000108464 NP_080526.2.92730 ENSMUSP00000108464

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]