SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Q9HMW5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Q9HMW5
Domain Number 1 Region: 63-225,353-492
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.04e-47
Family Tandem AAA-ATPase domain 0.0000435
Further Details:      
 
Domain Number 2 Region: 568-700
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 2.28e-27
Family XPF/Rad1/Mus81 nuclease 0.000053
Further Details:      
 
Domain Number 3 Region: 711-778
Classification Level Classification E-value
Superfamily RuvA domain 2-like 0.0000000000000826
Family Hef domain-like 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Q9HMW5
Sequence length 784
Comment (tr|Q9HMW5|Q9HMW5_HALSA) ATP-dependent RNA helicase homolog eIF-4A {ECO:0000313|EMBL:AAG20456.1} KW=Complete proteome; Reference proteome OX=64091 OS=(Halobacterium halobium). GN=VNG_2356G OC=Halobacteriaceae; Halobacterium.
Sequence
MSEEMGYVDHPMLADGVIEARQYQLQLAAAARQGHTLVCLPTGLGKTTVSLLVTAYRLAD
DAGGTALLLAPTKPLVEQHAGFYREALAIPDDDVVVFTGETRPDDRRAAWTDARVVVATP
QVVENDLVGGRIDMDDVVHCTFDECHRATGDYAYTYVAERYHADAAAPLVTAMSASPGGT
EAEIRTVCENLGVGNVEVMTEDDADVGEHTHDTDVQWERVTLPEEILEVRDAINDVIEDR
LAKLREIGVTKASSPDISQKDLNEIRARLQQLIDDDDSDGYQGMSVHAEVMKLKRAVELV
ETQSVESVRRYFERQRNAANTAGASKASQRLVSEPAVKRAMRTAREFDGLHPKFRQARML
LAETLGIEDGDRVIVFTESRDTAEALTAFLGEHFDTRRFVGQGDADGSDGMTQTEQRETL
AEFRNGDFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAIRSVQRKGRTGRQTAGRVVVLL
AEDTRDEAYFWISRRREQEMTEELQSLKGRADELETELGGDGAQQALDEFGDAEAAGEEP
AAPAPEDVSDGEDTEGVAARVDGAGEAVEVVVDQRELDSTIARELSKRDGVETRLETLAV
GDYVVSDRVAVERKSHSDFMDTLLGSERSIFEQAKELARQYTRPVLVVEGDGDLYAERNV
HPNAVRSAMASLAVDWGLSVMHTNGEGDTTEMIETIAEREQTTNDRAVSAHGEKAAKTQG
EQQEYVVSSITDVGPVTARSLLDTFGSVEAVMTASEDELTAADGVGAVTAERIRGVVGTE
YQPE
Download sequence
Identical sequences B0R7P3 Q9HMW5
gi|169236908|ref|YP_001690108.1| WP_010903758.1.1784 WP_010903758.1.50382 gi|15791152|ref|NP_280976.1| 478009.OE4310F 64091.VNG2356G

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]