SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for S8E0M1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  S8E0M1
Domain Number - Region: 121-157
Classification Level Classification E-value
Superfamily HMG-box 0.0613
Family HMG-box 0.0095
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) S8E0M1
Sequence length 696
Comment (tr|S8E0M1|S8E0M1_FOMPI) Uncharacterized protein {ECO:0000313|EMBL:EPS98312.1} KW=Complete proteome; Reference proteome OX=743788 OS=Fomitopsis pinicola (strain FP-58527) (Brown rot fungus). GN=FOMPIDRAFT_1051703 OC=Agaricomycetes; Polyporales; Fomitopsis.
Sequence
MARTKPAKWNDTQSLAVLAYVQEYMAAPQDDREEVVEKVLSDLKRLPLEDLARFTSDTDK
AMQVSKWLQKHYAQLKEEMKGFKGTTRGCDLWAREEENKTAILQGVYQRHRGVSPLDAYC
SSMWKTWKALSKQDRAYWAAKATAVRAAVNGNLRDYEPPQLTVEALNAAMVRRVNAIQRK
LWVELGVCVSVLWAGHTVDRGFQFGIDDAMKLMFGQNISAHYMHAGKYFAEDTYIADFKE
CVMKWREWDDSDEDTSILLGGTNKQSKAQPRSNLGPLYEMDEATGLPILPPVQLLERLES
KNSHYWVALVRQFLNHHYKAASGGKVKAVPWKDFVGPGKDLSWLPEHMWDRAAVPFADPS
KVSKPNLITLVRTWSASNQDDLRLKGYQSADKHSILDTEYDTWLKRWEEDSELREAEKEL
ARERLEKKKAKSSGGANTSTPAVTPVSGDAVAASTSSSAQTPPIPPGVASLSTATQAKDA
PQAKAHPKPKAPQKPKAAPKTKAAPKANAVPTATQGVIAKATLAQPDSSPPNAALPSQHI
PGSQVASAPQVALSQVPSKQPAGKGKGRALALSEEPGEQEKPSERQGSGERGWPTYNAAD
YDEDMPSPLDLLTQASSGAGQGGGSSRRRGGLMPPAVNSSVNPAMIMAAPGNTGSALAET
RSALQPTTIAPRPTPINCIRENRPSSSRLLQQSSTL
Download sequence
Identical sequences S8E0M1
jgi|Fompi3|1051703|gm1.7383_g

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]