SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for V3ZNC9 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  V3ZNC9
Domain Number 1 Region: 73-84,199-404
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 7.34e-29
Family Nuclear receptor ligand-binding domain 0.00042
Further Details:      
 
Domain Number 2 Region: 2-82
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 7.95e-29
Family Nuclear receptor 0.00022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) V3ZNC9
Sequence length 416
Comment (tr|V3ZNC9|V3ZNC9_LOTGI) Uncharacterized protein {ECO:0000313|EMBL:ESO92878.1} KW=Complete proteome; Reference proteome OX=225164 OS=Lottia gigantea (Giant owl limpet). GN=LOTGIDRAFT_120003 OC=Patellogastropoda; Lottioidea; Lottiidae; Lottia.
Sequence
MICAICQDRATGLHYGIITCEGCKGFFKRTVQNKRIYSCVASGDCEINRAQRNRCQFCRF
KKCLEKGMVLAAVREDRMPGGRNSGAVYNLYKVKYKKHKKKDLGIKKIYQKKLNSSPSLQ
LPRLPDIAENVTNSSDSRSTSTNSQCFGQDMWISSVSENLDGNIGCFGRSRSPLTSDTKM
EECKRLILELVEKDTLLGIAKSYGFEQLIANQDSVGHALCRIGDDIVVKLVHWIRNLPFY
SEIPLKLQSQMLTKKWHELLLLIMTAFGALDSKKSTSACPLFTDLFRQNISKIQCYLNKT
FGNSLSTNQLNKEIGPVIEKVTHIMLKFLSLQLSRQEFVCLQVILLMNDNINEMSGQSII
NIQERYMKVLQLYTKTQFSSQPYRFGELLLLLPQIKDASAMLLESKMIYIPFLLNT
Download sequence
Identical sequences V3ZNC9
jgi|Lotgi1|120003|e_gw1.33.361.1 XP_009056562.1.39240

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]