SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for V3ZZL4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  V3ZZL4
Domain Number 1 Region: 139-393
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.7e-63
Family Nuclear receptor ligand-binding domain 0.0000125
Further Details:      
 
Domain Number 2 Region: 71-151
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.85e-30
Family Nuclear receptor 0.0000838
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) V3ZZL4
Sequence length 407
Comment (tr|V3ZZL4|V3ZZL4_LOTGI) Uncharacterized protein {ECO:0000313|EMBL:ESO88110.1} KW=Complete proteome; Reference proteome OX=225164 OS=Lottia gigantea (Giant owl limpet). GN=LOTGIDRAFT_126514 OC=Patellogastropoda; Lottioidea; Lottiidae; Lottia.
Sequence
MTPTQPTVTSWRDHTDDLVGTTPTVVPPPLPPPNPTVTPTQTQIPTATTPTPQQNGGSPN
SETNNNNKQHIECVVCGDKSSGKHYGQYTCEGCKSFFKRSVRRNLNYTCRGNKNCPIDQH
HRNQCQYCRLRKCLKAGMRREAVQRGRIPPSQHPFAGQMGFPNGDPLGGHGYFSSFITML
LRAEPYPTSRYGQCMQNNIVGIDSICELAARLLFSAVEWARNVHFFPELHVNDQVELLRI
SWSELFVLNAAQSSMPCHLSPLLAAAGLHASPMPADHVVAFMENIRTFQDHVEKLKNLHI
DTAEYSCLKAIALFSSDSRSLSDINQIESLQERSQCALEEYVRSQYPNQPTRFGKLLLRL
PSLRAINSHVIEQLFFVRLVGKTHIETLIRDILLSGNSFSWPYMPIQ
Download sequence
Identical sequences V3ZZL4
jgi|Lotgi1|126514|e_gw1.54.105.1 XP_009061139.1.39240

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]