SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for W5MAP2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  W5MAP2
Domain Number 1 Region: 675-781
Classification Level Classification E-value
Superfamily PDZ domain-like 8.28e-25
Family PDZ domain 0.007
Further Details:      
 
Domain Number 2 Region: 15-110
Classification Level Classification E-value
Superfamily PDZ domain-like 2.23e-20
Family PDZ domain 0.00015
Further Details:      
 
Domain Number 3 Region: 172-271
Classification Level Classification E-value
Superfamily PDZ domain-like 2.63e-16
Family PDZ domain 0.075
Further Details:      
 
Domain Number 4 Region: 955-1067
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000000982
Family Nucleotide and nucleoside kinases 0.0011
Further Details:      
 
Domain Number 5 Region: 782-862
Classification Level Classification E-value
Superfamily SH3-domain 0.0000176
Family SH3-domain 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) W5MAP2
Sequence length 1308
Comment (tr|W5MAP2|W5MAP2_LEPOC) Tight junction protein 3 {ECO:0000313|Ensembl:ENSLOCP00000005451} KW=Complete proteome; Reference proteome OX=7918 OS=Lepisosteus oculatus (Spotted gar). GN= OC=Lepisosteus.
Sequence
MAVRFKDVNPEMEEMTIWEQYTITVNKDSRMGFGLAISGGRDKPNPMTGDTAVLISDVVR
NGPAAGRLQTRDRIVMVNGIAMENVTSSYAIQQLKTCGRTANITVKRPRTIQMPVAAHKA
PLSRAASRGTQLSDSGSEGNYYGRSQGRREREARSATPDRNGHALPLMSGMKRLPSQDGP
YRPIRATLLKKRATDEYGLKLGSQIFVKHMTPTGLAAKEGTLQEGDLILKINGMATENLS
LLDTKHLVERSEGKLSLVVLRDDRQFLVSIPDIEDSEPNSDNDEGSHGDSSGMDDISDLE
SEPPSSTRRRKISGRKERRTGRNHKPSSTPPVSQDLTPLQVVSLKSSVQAAPLQREPSDT
DSENGSLPPPPRLDTPDSRAPRSQYRVFPEAIPAKTRSSPLAPRHDSPQWSSPSSRPSLR
GDLESESDRSLSPPSLRDSPSVTSQSSRYRVLPEVTQPAFRASPLALRQDPPRRGHSPGA
PPPRGPSDSESDHSSPVPSRWTDTSHSIEPRNRYRLLSDVSQPRSHEPPPSLEPPRWVAP
TVQPSLRAPESDSESEVNSSIPPRHDDAPDGRGKYRAFPDVGQPVGPGQDSPPRGHSPIG
PPPEDFSDSETESIPSPPRRYESKGYWEQNSRGSIIPPSNGMIRPGVPMEDVSEVHSRAS
EEPIYSVPPDSPRVRRANSGYSSDLRTVDFVKDGSVGLRLVGGNDVGIFVGGVQPQSQAH
QQGMREGDQILQVNGVDFGHFTREEAAMFLLNIRSGEQVVIETQNKMDIYRKIMQSNLGD
SFFIRTHFDQVAEGSHGLNFTRGEVFRVVDTMHHGKLGTWLAVRMGNDLHELDKGTIPNY
KRAEVIANMEKAQKSSAASSQVPGPRAEFWKLRGLRGAKKNVRRSRDDLLQLTIQAKYPA
YEKVLLREASFKRPIAILGPLNDVAMEKLAREMPEEFEVAQMVPRSGGEGSSSVIKLEAV
KQISEQDKHPLLDITPTAVERLNYIQYHPLVLFLDPHSRKDVKAMRKRLCPDSKKSSRRL
YAQALKTRKYFAHLFSARIELQPGSDMWYEVLKDRICSLQTKPVWVSEVTLESGGEEELD
ALSRSHSSDYLSCDSRATSDYEDTDGEAYTDGEAYTDEDLDEPYGGREAPRHVGVSLARS
SEPAAGEEGPPGFVPDDPRASGRRPPLLHVPEPRSRRQDDPREPSPTSFSEDDPSRFGTP
EASAPRPRLESPPNLRASDSLHSLPDPPPHVTPPGGSHPEIQEEASRAVVAEPEEKKPPQ
PKFVVLAHHQALQWRRSQIQGSDSSDDHAENAVAAADDDDEWGPATEL
Download sequence
Identical sequences W5MAP2
ENSLOCP00000005451 XP_015220953.1.81211

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]