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Domain assignment for W5NCP2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  W5NCP2
Domain Number 1 Region: 10-85
Classification Level Classification E-value
Superfamily PDZ domain-like 5.65e-18
Family PDZ domain 0.00072
Further Details:      
 
Domain Number 2 Region: 316-345
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000000285
Family LIM domain 0.0031
Further Details:      
 
Weak hits

Sequence:  W5NCP2
Domain Number - Region: 283-315
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00159
Family LIM domain 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) W5NCP2
Sequence length 361
Comment (tr|W5NCP2|W5NCP2_LEPOC) PDZ and LIM domain 2 (mystique) {ECO:0000313|Ensembl:ENSLOCP00000018401} KW=Complete proteome; Reference proteome OX=7918 OS=Lepisosteus oculatus (Spotted gar). GN= OC=Lepisosteus.
Sequence
EMSLTVNLIGPSPWGFRISGGRDFKKAIAVSKVNGGSKAESAGLRLGDVIAEINGESAAE
MLNVEAQNKIKSSKTKLQLVVDRSEPLSPGQTNGLTSPEHLAVRFQEALQPSRDENYNDY
SFSGPPSLSPTPYSAERKRDAHTTFSTKSFQTHSWSPVEKVASPRTSSRPVSQEFVTDVR
SNSLSRTPTPPGRYSPQSPREREPPLSPRRSSDAGMQRFDRDSEVYKMIQENKESRSAPR
QSSTFRLLQEVLEADEKGLPEAALRFPGKLSPNAPKPSSSVAGVQKFHTCEKCGTSIVTQ
AVRIMEDRYRHPECYTCTQCCLNLKMRGHFWVGDEMFCEKHAKERYQGPGSTHVPMVSPH
H
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Identical sequences W5NCP2
ENSLOCP00000018401

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