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Domain assignment for W5NKN1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  W5NKN1
Domain Number 1 Region: 262-361
Classification Level Classification E-value
Superfamily PDZ domain-like 2.63e-24
Family PDZ domain 0.0091
Further Details:      
 
Weak hits

Sequence:  W5NKN1
Domain Number - Region: 87-178
Classification Level Classification E-value
Superfamily Myosin rod fragments 0.068
Family Myosin rod fragments 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) W5NKN1
Sequence length 444
Comment (tr|W5NKN1|W5NKN1_LEPOC) Golgi-associated PDZ and coiled-coil motif containing {ECO:0000313|Ensembl:ENSLOCP00000021190} KW=Complete proteome; Reference proteome OX=7918 OS=Lepisosteus oculatus (Spotted gar). GN= OC=Lepisosteus.
Sequence
MSATAGGVSPAPQGSALSGPGSGMSMFRWLEVLEKEFDKAFVDVDLLLGEIDPDQADITY
EGRQKMTTLSSCFAQLCHKAQTIFQLNHKLEAQLVDLKSELTDVQAEKAVIEKEVHDQLL
QLHAIQLQLHSKTGQNVDSGSIKAKLEKELEANKKEKVKEAKLEAEVRLQKKENEALRRH
IAVLQAEVYGARLAAKYLDKELAGRVQQIQLLGRDMKGPAHDKLWNQLEAEIHLHRHKTV
IRACRGRNDPKKPLPSPTGHDTETLKKTQGVGPIRKVLLSKEDHEGLGISITGGKEHGVP
ILISEIHPTQPAERCGGLHVGDAILAVNGINLRDAKHKEAVTILSQQRGEIEFEVVYVAP
EVDSDDENVEYEDDSGHRYRLYLDELEETSAAKRSSSSGDTGSLQALEKKSVSEGVENGD
LGISNETASEETGPKTAESADSSS
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Identical sequences W5NKN1
XP_015212001.1.81211 ENSLOCP00000021190

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