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Domain assignment for W6XXN0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  W6XXN0
Domain Number 1 Region: 19-277
Classification Level Classification E-value
Superfamily Galactose mutarotase-like 9.1e-78
Family Rhamnogalacturonase B, RhgB, N-terminal domain 0.0000000834
Further Details:      
 
Domain Number 2 Region: 369-537
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 6.12e-49
Family Rhamnogalacturonase B, RhgB, C-terminal domain 0.00000121
Further Details:      
 
Domain Number 3 Region: 280-362
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.0000000000114
Family Rhamnogalacturonase B, RhgB, middle domain 0.0000638
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) W6XXN0
Sequence length 538
Comment (tr|W6XXN0|W6XXN0_COCCA) Rhamnogalacturonate lyase {ECO:0000256|PIRNR:PIRNR011794} KW=Complete proteome; Reference proteome OX=930089 OS=Bipolaris zeicola 26-R-13. GN=COCCADRAFT_37792 OC=Pleosporaceae; Bipolaris.
Sequence
MYLRTALLTLASTTTTLAAFGVTKGKNSITIDSGAPSSSSPFLFTVNTLNCDITSLKYAG
EELQWPDKGSHIEMGLGSATVTYTTIGTQYIKITCTTPTLTQYMVVKAGESTIYMATDIT
EEPTIGELRFIARIDSGKLPLSYPFGVVSTTANSTATVEGSDVFVVGGETRSKFYSSERF
IDDAVHCVYRDTNAIHACLLMDSYSYETSAGGPFHRDINTNNGGASNSLTFYMNSNHVQL
EKYRMGMKGPYALSFSRSSIPKGGSSMDTTFFKDLSIPNYVPPSARGTVTGKATGVSSSA
QAVLHWYNDAAQYWAYASSSSGTFTSPAMKPGTYTQVLYQGEFKVKATSVTVAAGRTTTA
NIAADTEPKTSLWRIGEWDGQPKGFRNADKQLRMHPSDSRMASWGPLTYTVGTSALDSVP
MALVKDLNPLTIAFTAKQKNSTPLTLRVGTTLAFAGCRPAVTVNTSFSAPVPAAPTKIAS
RGFTRGAYRGFGEVYNYAIPAGTLVEGANTIRIACVSGESGTGFLAPNVILDAIELLE
Download sequence
Identical sequences W6XXN0
jgi|Cocca1|37792|fgenesh1_pm.102_#_2 XP_007713479.1.9443

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