SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTTRP00000011935 from Tursiops truncatus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTTRP00000011935
Domain Number 1 Region: 124-422
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 5.87e-89
Family Nuclear receptor ligand-binding domain 0.00000000132
Further Details:      
 
Domain Number 2 Region: 20-109
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 9.78e-29
Family Nuclear receptor 0.00000572
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTTRP00000011935   Gene: ENSTTRG00000012578   Transcript: ENSTTRT00000012578
Sequence length 427
Comment pep:known_by_projection genescaffold:turTru1:GeneScaffold_17:365699:396890:-1 gene:ENSTTRG00000012578 transcript:ENSTTRT00000012578 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEAMAAGASLPDPGDFDRHVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTC
PFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSL
RPKLSNEQQRIIAILLDAHHKTYDPTYADFSQFRPPVREGENEGNHPSGPWFIHTPSFSG
NSSSACSDRYTSSPDTMEPTGFSSLDLSEEDSDDSSVTLDLSQLSMLPHLADLVSYSIQK
VIGFAKMIPGFRDLTPEDQIVLLKSSAIEVIMLRSNQSFTMDDMSWTCGSLDYKYQVSDV
TKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALVEAIQDRLS
NTLQTYIRCCHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPECSMKLTPLVLE
VFGSEIS
Download sequence
Identical sequences ENSTTRP00000011935 ENSTTRP00000011935

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]