SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTTRP00000014890 from Tursiops truncatus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTTRP00000014890
Domain Number 1 Region: 242-334
Classification Level Classification E-value
Superfamily Multidrug resistance efflux transporter EmrE 0.0000889
Family Multidrug resistance efflux transporter EmrE 0.022
Further Details:      
 
Weak hits

Sequence:  ENSTTRP00000014890
Domain Number - Region: 101-187
Classification Level Classification E-value
Superfamily Multidrug resistance efflux transporter EmrE 0.0392
Family Multidrug resistance efflux transporter EmrE 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTTRP00000014890   Gene: ENSTTRG00000015714   Transcript: ENSTTRT00000015714
Sequence length 353
Comment pep:known_by_projection genescaffold:turTru1:GeneScaffold_1180:90160:105116:1 gene:ENSTTRG00000015714 transcript:ENSTTRT00000015714 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPLPGRTVKPGAARTRRRRRRQRAAGGRPGASSEGEGPRLRGGHGSADRVRGRGRIAGSC
STYWCPSASCSSTNGSMSTTFPNMSLTLVHFVVTWLGLYVCQKLDMFAPKSLPPSKLLLL
ALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIVIQTFCYKKTFSTKIQLTLIPITVG
VILNSYYDVKFNFLGTVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLL
VAVPFFEPVFAEGGIFGPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMFGHFK
FCITLFGGYVLFKDPLSINQGLGMLCTLFGILAYTHIKLSEQEGSKSKLMQRP
Download sequence
Identical sequences ENSTTRP00000014890 ENSTTRP00000014890

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]