SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for psu|Tc00.1047053510275.350 from Trypanosoma cruzi strain CL Brener

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  psu|Tc00.1047053510275.350
Domain Number 1 Region: 53-486
Classification Level Classification E-value
Superfamily Sialidases 3.08e-116
Family Sialidases (neuraminidases) 0.0000069
Further Details:      
 
Domain Number 2 Region: 503-723
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.47e-50
Family Trypanosoma sialidase, C-terminal domain 0.0000166
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) psu|Tc00.1047053510275.350
Sequence length 894
Comment | organism=Trypanosoma_cruzi_CL_Brener_Esmeraldo-like | product=trans-sialidase, putative | location=TcChr40-S:1248512-1251196(+) | length=894
Sequence
MHSRVAAVKAPRTHNRYRVTGSSGRRREGGESEPQRPIMSRRVFTSAVLLLLVVMMCCGS
AAASASEPSKRKLFVWRDVRDGETVSSLCVPSLLKVGSDVFAVAEAQDTKKEEGDFTGIA
SELLEWNGEQKKEELDKTKLKTQVLEECPSDKANCASQIVAQASFERGTKVYLARPTTVV
QGSDIYMLAGIYNLDAADNTSAYWGLLLSRGNVSGDEKSKKRIHWNHIDALQSISNMQKE
ESLTDLIGGGGSGVKMNDGTLVFPVEGIKSNGAAGVTDTVSLVIHSTGTEGWKLSKDVSA
GGCSDPSVVEWEDKKLMMMTACDDGRRRVYESGDKGDSWTEALGTLSRVWGNKHTGPEKG
VGSGFITAKIDNRDVMLVTLPVYSKEKEKEENGKGRLHLWLTDNTHIADIGPVSEKEEDV
AASSLLYESTESKEELIALYEKKKGGDKDTSLGMASVRLTAQLQRVKELLATWNEVDERI
SQLCATLLAQEDTSPDNPCRSTFKITDGLVGFLSGNFSENTWMDEYLGVNATVHNKGGAA
KAEDGVKFQGAWAEWPVGKQGENQLYHFANYKFTLVATVSVHGEPEEDTPIPFLGAKMTG
AGNSVFLGLSYGKEKKWQLLCGVETKSKDRSVFWGPKTKDHVVILLRNGTQGSAYVDGKR
VGDVPCALANTDSKDISYFYIGGDGDKTRKQEDVPVTVTNVLLYNRPLDEAEIGALNPNK
DPIQLLEKEAAKPSTVSSDSVVPPSPLVTATAQQTETPSTPAGTQLTEQGQSMGSSKGAG
SGGASKSAVSTLSTPSAEEDSLVQSASGTSPDGTQTVGGGFTADGEPTMETREGGTNGQE
EEVNKQVGDVNATALSSSLGNVSQGNNSDTGTVCESGLVPSLLLLLGLWGFAAL
Download sequence
Identical sequences Q4E283
gi|71667587|ref|XP_820741.1| psu|Tc00.1047053510275.350 XP_820741.1.87722

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]