SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|479319038|ref|YP_007859089.1| from Streptomyces sp. PAMC26508

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|479319038|ref|YP_007859089.1|
Domain Number 1 Region: 121-232
Classification Level Classification E-value
Superfamily Tetracyclin repressor-like, C-terminal domain 1.04e-17
Family Tetracyclin repressor-like, C-terminal domain 0.0026
Further Details:      
 
Domain Number 2 Region: 47-107
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000000000175
Family Tetracyclin repressor-like, N-terminal domain 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|479319038|ref|YP_007859089.1|
Sequence length 249
Comment transcriptional regulator [Streptomyces sp. PAMC26508]
Sequence
MRLRSERPTARREADQVRQAAHNPVRDPATGPAGPSCPDGEPRRGRPRSAAVERAILDAV
VQLLEAGETLDGLSIERIARTAGVGKATIYRRWSGKEELFVDVLRDIEPPDPTVSGTAGL
DDLRVLLESMRTRGLAQRSSALLHNVFVQMKKHPRLWTEYQSTVIAPRRVATVAAVQRAV
DAGELRDDLDVEFMGDLFLGPMLVRTVHRPEASLPEDLADRIIGTLLQGLAPRGRKPQAT
AGEPTAAPA
Download sequence
Identical sequences M9TUL4
gi|479319038|ref|YP_007859089.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]