SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPCAP00000006404 from Procavia capensis 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPCAP00000006404
Domain Number 1 Region: 2-275
Classification Level Classification E-value
Superfamily L domain-like 1.42e-48
Family Ngr ectodomain-like 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000006404   Gene: ENSPCAG00000006892   Transcript: ENSPCAT00000006849
Sequence length 495
Comment pep:novel genescaffold:proCap1:GeneScaffold_7300:10042:204988:1 gene:ENSPCAG00000006892 transcript:ENSPCAT00000006849 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
QLTWLYLDHNHISNIDENAFNGIRRLELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLH
SLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIR
LKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIE
AFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGNIWECSRNICSLVNW
LKSFKGLRENTIICASPKELQGVNVIDAVKNYSICGKSTTERFDLARALPKPTFKPKLPR
PKHESKPPLPPTVGATEPGPETDADTEHISFHKIIAGSVALFLSVLVILLVIYVSWKRYP
ASMKQLQQRSLMRRHRKKKRQSLKQMTPSTQEFYVDYKPTNTETSEMLLNGTGPCTYSKS
GSRECEIPLSMNVSTFLAYDQPTVSYCGVHHELLSHKSFETNAQEDAMETPLETELDLNT
ITTAGRVSDRQQLAA
Download sequence
Identical sequences ENSPCAP00000006404 ENSPCAP00000006404

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]