SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPVAP00000010785 from Pteropus vampyrus 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPVAP00000010785
Domain Number 1 Region: 254-306
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.04e-17
Family Classic zinc finger, C2H2 0.0053
Further Details:      
 
Domain Number 2 Region: 315-367
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.04e-16
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 3 Region: 353-411
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.78e-16
Family Classic zinc finger, C2H2 0.025
Further Details:      
 
Domain Number 4 Region: 397-451
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000484
Family Classic zinc finger, C2H2 0.035
Further Details:      
 
Domain Number 5 Region: 224-265
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000486
Family Classic zinc finger, C2H2 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPVAP00000010785   Gene: ENSPVAG00000011440   Transcript: ENSPVAT00000011440
Sequence length 579
Comment pep:novel genescaffold:pteVam1:GeneScaffold_3490:40867:51862:-1 gene:ENSPVAG00000011440 transcript:ENSPVAT00000011440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLPPPHYPTLLTVPASVS
LPSGINMDTESKSDQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPG
LVITSPSGSLVTTASSAQTFPISAPMIVSALPPGSQALQVVPDLSKKVSSALTEEGGGGG
GGGGSVAPKPPRGRKKKRMLESGLPEMNDPYVLSPEDDDDHQKDGKTYRCRMCSLTFYSK
SEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQ
QHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHL
QQHTRIHTGDRSYLCAHPGCEIAFTQLSNLESHRRQHNKDKPFKCHNCHRAYTDAASLEV
HLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQA
QAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQPQQQPQPPHFQSPGAAPQGGGGGDSNP
NPPPQCSFDLTPYKTAEHHKDICLTVTTSTIQVEHLASS
Download sequence
Identical sequences ENSPVAP00000010785 ENSPVAP00000010785

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]