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Domain assignment for A1EH33_9HEPC from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A1EH33_9HEPC
Domain Number 1 Region: 1-153
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.63e-87
Family Viral proteases 0.000000132
Further Details:      
 
Domain Number 2 Region: 287-587
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.84e-58
Family RNA helicase 0.0000000000639
Further Details:      
 
Domain Number 3 Region: 161-292
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.5e-26
Family RNA helicase 0.000000351
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A1EH33_9HEPC
Sequence length 598
Comment AC=A1EH33; DE=SubName: Full=Polyprotein; Flags: Fragment; OS=Hepatitis C virus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; OC=Hepacivirus.
Sequence
QIVSTAAQTFLATCINGVCWTVYHGAGTRTIASPKGPVIQMYTNVDKDLVGWPAPQGSRS
LTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHAVGI
FRAAVCTRGVAKAVDFVPVENLETTMRSPVFTDNSSPPAVPQSFQVAHLHAPTGSGKSTK
VPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGNPITYSTYGKF
LADGGCSGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLATATPPGSVTVPH
PNIEEVALSTTGEIPFYGKXIPLEAIKGGRHLIFCHSKKKCDELAAKLVALGVNAVAYYR
GLDVAVIPTSGDVVVVATDALMTGFTGDFDSVIDCNTCVTQTVDFSLDPTFTIETTTLPQ
DAVSRTQRRGRTGRGKPGIYRFVAPGERPSGMFDSSVLCECYDAGCAWYELTPAETTVRL
RAYMNTPGLPVCQDHLEFWEGVFTGLTHIDAHFLSQTKQSGENFPYLVAYQATVCARAQA
PPPSWDQMWKCLTRLKPTLHGPTPLLYRLGAVQNEVTLTHPVTKYIMTCMSADLEVVT
Download sequence
Identical sequences A1EH33
A1EH33_9HEPC

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