SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A4UVR9_SDV from UniProt viral sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A4UVR9_SDV
Domain Number 1 Region: 6-134
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 0.00000000000432
Family Caliciviridae-like VP 0.054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A4UVR9_SDV
Sequence length 408
Comment AC=A4UVR9; DE=SubName: Full=Coat protein; Flags: Fragment; GN=Name=CP; OS=Citrus mosaic sadwavirus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Secoviridae; Sadwavirus.
Sequence
GKAAYLGLTASLFSMYNFWKGSYILKVDVLSKGSCAGAISIYVPPPGTSADHYSQSQLDT
LPRYELPWRGTGSARFEVENFSWIGWHLTKPQRYVTNEDWFSLNAGVVVVLNQPPTTRTG
GSSDIRVIFRIVKFKNLTLKERSTTCDIFAGIKDATYVSPLLDVLDNSISAPASVASDPD
ITFDATSSVQTNDMLPRSFGAYYAYLLGGAASGKRWHSYVLPITMGHHRSEIGTSKTGYL
HEDLDESVRIRYSLRNPLHILCAAGAYYATDLLFTLVIDGDFSSERAFAQLGLIQTPLME
YYDGYTTDRTLSSEGGYSNQLGVGKSYIQLLVPRRNYRARSITTDTAALFFETIGSLSVR
FTASDKIKGVHLFVEAAGPIDIDGYGRGLDIGHTDKSFVLMPSLRTAA
Download sequence
Identical sequences A4UVR8 A4UVR9
A4UVR8_SDV A4UVR9_SDV

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]