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Domain assignment for A4ZHH7_9HEPC from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A4ZHH7_9HEPC
Domain Number 1 Region: 2427-2987
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.83e-143
Family RNA-dependent RNA-polymerase 0.0000000000000456
Further Details:      
 
Domain Number 2 Region: 1029-1213
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 4e-98
Family Viral proteases 0.00000007
Further Details:      
 
Domain Number 3 Region: 1350-1651
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.31e-54
Family RNA helicase 0.000000000337
Further Details:      
 
Domain Number 4 Region: 1222-1353
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.54e-25
Family RNA helicase 0.00000054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A4ZHH7_9HEPC
Sequence length 3016
Comment AC=A4ZHH7; DE=RecName: Full=Genome polyprotein; OS=Hepatitis C virus subtype 6i. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; OC=Hepacivirus.
Sequence
MSTLPKPQRKTKRNTYRRPMDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRG
RRQPIPKARPPTGRSWGQPGYPWPLYGNEGCGWAGWLLSPRGSRPNWGPNDPRRRSRNLG
KVIDTLTCGLADLMGYIPVLGGPLGGVAAALAHGVRAIEDGVNYATGNLPGCSFSIFILA
LLSCLTTPVSAIHAKNASGVYHLTNDCPNSSIVYEAESIILHLPGCVPCVRSKNVSRCWY
SVSPTLAVFDASTPVHGFRRHVDLIVGAAAFCSAMYIGDLCGGVFLVGQVFTLRPKIHTT
VQDCNCSIYTGHITGHRMAWDMMMNWSPTVTYVVSSALRTPQLLLEIFLGAHWGVLGAVV
YYCMVANWAKVLVVLLMFAGVDASTYISGSSAGSTVNGLTGLFTRGPQQNLQLINSNGSW
HVNRTALNCNDSLQTGFFVPLFYKQNINTSGCVERMSSCKPLDQFDQGWGPLSYFNVSGP
SEERPYCWHYPPRPCEVVPAESVCGPVYCFTPSPVVIGTTDKRGLPTFTWGENETDVFLL
GSARPPQGSWFGCTWMNGTGYVKTCGAPPCLTQPTKGNNTLVCPTDCFRKHPDTTFGKCG
SGPWLTPRCLVDYPYRLWHYPCTVNFTIHKVRMFVGGIEHRFGAACNWTRGDRCELDDRD
RVEMSPLLFSTTQMAILPCTFTTMPALSTGLIHLHQNIVDVQYLYGISTAIVSWALKWEY
VVLAFLVLADSRLCACLWLMFLVGQAEAALENLIVLNAASAAGNHGLVWGLIFICCVWHV
RGRLVPLSTYAFLQLWPLLLLVLALPRRAYAQDTDQAASVGLLALGIITIFTLTPAYKQL
LVGVLWWTQYFIARAEAMLHVWIPPLQVRGGRDAVILLSCLFHPQLGFEVTKILMALLGS
MYLLQYSFLKTPYFVRAHILLRACMLFRGLASGKYXQALLLRLGAWTGTYVYDHLTPLTD
WACDGLRDLAVAVEPVVFSPMEKKVITWGADTAACGDIIEGLPVSARRGNLVFLGPADDV
KGKGWRLLAPITAYAQQTRGLMGTIVTSLTGRDKNVVEGEVQVVSTATQSFLATTLNGVL
WTVYHGAGSKTLAGPKGPICQMYTNVEQDLVGWPAPSGARSLTPCSCGSSDLYLVTRNAD
VIPARRRGDSRAALLSPRPISTLKGSSGGPMLCPSGHVAGIFRAAVCTRGVAKSLDFVPV
ENMQTVQRSPSFSDNSTPPAVPQTYQVGYLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSV
AATLGFGAYMSKAHGIDPNIRTGVRTITTGGPITYSTYGKFLADGGCSGGAYDIIICDEC
HSTDPTTILGIGTVLDQAETSGARLTVLATATPPGSVTVPHPNITEEALPTTGEIPFYGK
GIPLDFIKGGRHLIFCHSKKKCDELAKQLTTLGINAVAFYRGVDVSVIPTDGDVVVCATD
ALMTGYTGNFDTVIDCNVAVTQVVDFSLDPTFTIETTTLPQDAVSRSQRRGRTGRGKHGV
YRYVSLGERPSGLFDSVVLCEAYDTGCAWYELTPAETTVRLRAYLNTPGLPVCQDHLEFW
EGVFTGLTHIDAHFLSQTKQAGESFAYLVAYQATVCARAKAPPPSWDVMWKCLLRLKPTL
TGPTPLLYRLGAVQNEVCTTHPITKYIMTCMSADLEVVTSTWVLVGGVLAALAAYCLSVG
CVVICGRVSTSGQPALIPDREVLYRQFDEMEECSSHIPYLPEAQAIAEQFKQKVLGLIQT
SAKQAEELKPVVTSAWPKLEQFWTKHLWNFVSGIQYLAGLSTLPGNPAIASLMSFSASLT
SPLSTSTTLLLNILGGWVASQLATPTASTSFVVSGLAGAAVGSIGLGKVIVDVLAGYGAG
ISGALVGFKIMCGETPSAEDMVNLLPALLSPGALVVGVVCAAILRRHTGPSEGATQWMNR
LIAFASRGNHVSPTHYVPETDASQRVTSILSSLTVTSLLRKLHAWINGDWSTPCAGSWLR
DVWDWXCTVLSDFKTWLKAKLVPALPGIPFFSCQRGFRGYWRGDGVCHTTCPCGADIIGH
VRNGTMRVVGPKWCSNTWHGTFPINATTTGPSVPIPEPNYTRALWRVSAEDYVEVKRVGD
SHFVVGATEDNLKCPCQVPAPEFFTEVDGVRIHRYAPKCKPLLRDEITFSVGMSSYAMGS
QLPCEPEPDVMVVTSMLTDPSHVTAEAAARRLARGSPPSLASSSASQLSALSLKGTCTTH
GPHPDAELIEANLLWRQEMGNNITRVESESKVIILDSFDPLVPEYDDREPSLSAECHRPN
RPKFPPALPIWARPDYNPPLLEPWKSPDYNPPMVHGCALPPPDKPPVPPPRRRKVVQLDA
SNVSTVLAQLAEKTFPQPASLTTGCGSGQAAHSTGSGEQSEEDGAASEADSYSSMPPLEG
EPGDPDLSSGSWSTISEEGDGVVCCSYSYSWTGALITPCAAEEEKLPINPLSNSLIRHHN
LVYSTSSKSAGLRQKKVTFDRVQLVDQHYYDTLKEIKLQASQVQARLLTTEEACDLTPSH
SARSKFGYGAKDVRSHTRKAINHINSVWEDLLEDTQTPIPTTIMAKNEVFCVDTSKGGRK
PARLIVYPDLGVRVCEKKALFDITRKLPVAVMGDAYGFQYSPKQRVERLLRMWRSKKTPM
GFSYDTRCFDSTVTERDIRTEQDIYLCCQLDPEAQQAIKSLTERLYVGGPMYNSKGQLCG
QRRCRASGVLPTSMGNTITCFLKAKAACRAAGFTNFDMLVCGDDLVVISESAGVNEDIAN
LRAFTEAMTRYSATPGDLPSPSYDLELITSCSSNVSVAHDGDGRKYYYLTRDPVTPLARA
AWETARHTPVNSWLGNIIMYAPAIWVRMVLMTHFFQTLQAQETLDKVLDFDIYGVTYSIT
PLDLPVIIQRLHGMAAFSLHGYSPGELNRVAACLRKLGAPPLRAWRHRARAVRAQLITRG
GKAAICGRYLFNWAVKTKLKLTPLRGASDLDLSGWFAAGFSGGDXYHSASRARPRMLLLC
LLLLTVGVGIFLLPAR
Download sequence
Identical sequences A4ZHH7
A4ZHH7_9HEPC

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