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Domain assignment for A4ZU81_9HEPC from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A4ZU81_9HEPC
Domain Number 1 Region: 2426-2987
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2e-142
Family RNA-dependent RNA-polymerase 0.0000000000000383
Further Details:      
 
Domain Number 2 Region: 1028-1213
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 3.21e-97
Family Viral proteases 0.0000000696
Further Details:      
 
Domain Number 3 Region: 1349-1647
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.95e-52
Family RNA helicase 0.000000000334
Further Details:      
 
Domain Number 4 Region: 1221-1352
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.38e-24
Family RNA helicase 0.000000592
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A4ZU81_9HEPC
Sequence length 3015
Comment AC=A4ZU81; DE=RecName: Full=Genome polyprotein; OS=Hepatitis C virus subtype 6q. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; OC=Hepacivirus.
Sequence
MSTLPKPQRQTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSEXSZPRG
RRQPIPKARRQTGRTWAQPGYPWPLYGNEGCGWAGWLLSPRGSRPHWGPNDPRRRSRNLG
KVIDTLTCGFADLMGYIPVVGAPLGGVAAALAHGVRAIEDGINYATGNLPGCSFSIFLLA
LLSCLTVPASAVHYANKSGLYHLTNDCPNSSIVYEXDTVILHLPGCVPCVRVXNXSTCWL
XVSPTLAVPBAXTPVHGFRRHVDLMVGAATFCSAMYVGDLCGGLFLAGQLVYVRPRIHQT
TQDCNCSIYSGRITGHRMAWDMMMNWSPTTTLILSYVMRIPQLIXDIFXGGHWGVLAGLL
YYSMVGNWXKVLAVILLFAGVDAHTXITGGSAAXXTXGLXXLFSXGPXQHIQLINSNGSW
HINRTALNCNDSLXTGFIAGLFYARXFNSSGCXDRMSSCSPLAAFDQGWGPISYANISGX
QEDKPYCWHYGPRPCXXVPASKVCGPVYCFTPSPVVVGTTDSXGXPTYTWGDNESDXFLL
ASQRPPTGGWYGCTWMNXTGFVKTCGAPPCTFASSGNRSLTCPTDCFRKHPETTYSRCGS
GPWLTPRCLVDYPYRLWHYPCTVNFTIHKVRMFVGGVEHRLZAACNWTRGBRCELEDRDR
ADFSPLLFSTTELAILPCSFTTMPALSTGLIHLHQNIVDVQYLYGISTSVVAWAIKWEYV
VLAFLILADARVCACLWLMLLIGQAEAALENLIVLNAASAASIQGWGWCXLFLCCAWHIR
GRLVPAATYGALQLWPLLLLVLALPPRAFAQDQEQAACIGVSVIXFITIFTLTPHYKWLL
MQLLWWNQYFIARIEAMLHVWVPNLSVRGGRDAIILITCLLHPSLGFDVTKVLLALIGPF
YLLQASLLRVPYYVRAQALLRCCLLVRQLAGAKYIQACLLRVGAWTGTYIYDHLSPLADW
ASDGLRDLAVAVEPVIFSPMEKKVITWGADTAACGDILAGLPVSARRGRLLLLGPADXMR
DMGWRLLAPITAYCQQTRGLLGTIVTSLTGRDKNEVEGEVQVISTATQTFLASTINGVLW
TVYHGAGSKTLAGPKGPXCQMYTNVDQDMVGWPAPTGARSFTPCTCGASDLYLVTRXADV
IPARRRGDTRASLXSPRPLSTLKGSSGGPVLCSAGHAVGLFRAAVCTRGVAKAIDFVPVE
NMETTMRSPVFTDNSXPPAVPQTYQVGYLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVA
ATLGFGAYMSKAHGIDPNIRTGVRTIXTGGPITYXTYGKFLADGGCSGGAYDIIICDECH
STDPTTVLGIGTVLDQAETAGVRLTVLATATPPGSVTVPHPNITEVALPTTGEIPFYGKG
IPLEYVKGGRHLIFCHSKKKCDELAGQLRTLGLNAVAFYRGVDVSVIPTSGDVVVCATDA
LMTGYTGDFDSVIDCNVAVTQVVDFSLDPTFTIETTTVPQDAVARSQRRGRTGRGKHGVY
RYVSQGERPSGMFDSIVLCEAYDTGCAWYELTPSETTVRLRAYLNTPGLPVCQDHLDFWE
GVFTGLTHIDAHFLSQTKQGGENFAYLVAYQATVCARAKAPPPSWDTMWKCLTRLKPMLT
GPTPLLYRLGAVQNEITTTHPITKYIMTCMAADLEVITSTWVIAGGVLAALAAYCLCVGS
AVICGRIITSGKPAVMPDREILYQQYDEMEECSQHIPYLAEGQQIAEQFKQKILGLLQNT
AKQAEELKPAVQSAWPKLEQFWQKHLWNFISGIQYLAGLSTLPGNPAVASLMSFSAALTS
PLSTSTTLXLNILGGWVASQLAPPSASTAFVVSGLAGAAVGSIGLGRVIVDILAGYGAGV
SGALVAFKIMSGEAPALEDMVNLLPALLSPGALVVGVVCAAVLRRHVGPSEGANQWMNRL
IAFASRGNHVSPTHYVPETDASKAVTTILSSLTITSLLRRLHEWINGDWTTPCATSWLRD
IWDWVCTVLSDFKTWLKAKLVPSLPGIPFLSCQRGFRGAWRGDGICHTTCPCGANITGHV
KHGTMKIHGPKTCSNIWHGTFPINATTTGPSVPIPEPNYRRALWRVSAEEYVEVARVNDC
HYIVGATADNLKCPCQVPAPEFFTEVDGVRLHRYAPPCRPLIRDEVTFTVGLSSYVMGSQ
LPCEPEPDVMVLTSMLTDPDHITAETAGRRLARGSPPSLASSSASQLSAPSLKATCTTDA
QHPDAELLEANLLWRQEVGGNITRVESENKIIVLDSFDPLVAEVDDREISTAAECHRPPR
QKYPPALPIWARPDYNPPLIETWKKPDYDPPTVAGCALPPKGLPPVPPPRRKKVVQLDES
SASAALAALAFKAFPPDGSGSQAESGKGTSIPTSDDTPSPDDEDATSEAGSYSSMPPLEG
ELGDPDLSSGSWSTVSEETSVVCCSMSYSWTGIPVTPCAAEEEKLPISTLSNSLIRHHNL
VYSTTSRSASLRQKKVTFDRLQVLDQHYQDVLKEIKARASEVSARLLSTEEACSLTPPHS
ARSKFGYGAKEVRSHASKAINHINSVWEDLLEDSSTPIPTTIMAKNEVFCVDPRKGGRKP
ARLIVYPDLGVRVCEKRALYDLTQKLPVALMGAAYGFQYSPKQRVDQLLKMWRSKKTPMG
FSYDTRCFDSTVTERDIQTEHAIYQCCQLDPAARKVITSLTERLYCGGPMYNSRGQACGT
RRCRASGVLTTSLGNTLTCFLKASAACRAANLKNPDMLVCGDDLVIISESVGVSEDIGAL
RAFTEAMTRYSAPPGDEPHPEYDLELITSCSSNVSVAHDHTGQRYYYLTRDPTTPLVRAA
WETARHTPVNSWLGNIIMYAPTIWVRMVLMTHFFSILQSQETLHRVLDFDIYGVTYSITP
LDLPRIIQRLHGMAAFSLHGYSPGELNRVASCLRKLGAPPLRAWRHRARAVRAKLIAQGG
KAAECGKYLFNWAVKTKLKLTPLRGAGTLDLSGWFAPGGRGGDIFHSVSRARPRTFLLFL
LLLSVGVGIFLLPAR
Download sequence
Identical sequences A4ZU81
A4ZU81_9HEPC

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