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Domain assignment for A8DF17_9HEPC from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A8DF17_9HEPC
Domain Number 1 Region: 2421-2982
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.14e-140
Family RNA-dependent RNA-polymerase 8.68e-16
Further Details:      
 
Domain Number 2 Region: 1027-1212
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 3.62e-108
Family Viral proteases 0.0000000151
Further Details:      
 
Domain Number 3 Region: 1348-1650
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.05e-53
Family RNA helicase 0.0000000000683
Further Details:      
 
Domain Number 4 Region: 1220-1351
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.84e-25
Family RNA helicase 0.000000365
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A8DF17_9HEPC
Sequence length 3010
Comment AC=A8DF17; DE=RecName: Full=Genome polyprotein; OS=Hepatitis C virus subtype 1b. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; OC=Hepacivirus.
Sequence
MSTNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRG
RRQPIPKARQPEGRAWAQPGYPWPLYGNEGMGWAGWLLSPRGSRPSWGPTDPRRRSRNLG
KVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLA
LLSCLTIPASAYEVRNVSGVYHVTNDCSNSSIVYEAADMIMHTPGCVPCVREGNSSRCWV
ALTPTLAARNASVPTTTIRRHVDLLVGAAAFCSVMYVGDLCGSVFLVSQLFTISPRRHET
LQDCNCSIYPGYITGHRMAWDMMMNWSPTTALVVSQLLRIPQAVVDMVAGAHWGVLAGLA
YYSMAGNWAKVLIVLLLFAGVDGHTSVSGGAAARTTQGFAGIFSPGSSQKIQLVHSNGSW
HINRTALNCNDSLQTGFLAALFYVHKFNSSGCPERMASCRSIDKFDQGWGPITYNEQPSL
DQRPYCWHYAPEPCGIVPASTVCGPVYCFTPSPVVVGTTDRFGVPTYSWGENETDVLLLN
NTRPPGGNWFGCTWMNGTGFTKTCGGPPCNIGGAGNNTLICPTDCFRKHPEATYTKCGSG
PWLTPRCLVDYPYRLWHYPCTVNFTIFKVRMYVGGVEHRLNAACNWTRGERCDLEDRDRS
ELSPLLLSTTEWQILPCSFTTLPALSTGLIHLHQNIVDIQYLYGIGSAVVSFAIKWEYVV
LLFLLLADARVCACLWMMLLIAQAEAALENLVVLNAASVAGAHGILSFLVFFCAAWYIKG
RLVPGAAYAFYGVWPLLLLLLALPPRAYAMDREMAASCGGAVFVCLVVLTLSPHYKAFLA
RLIWWLQYFITRAEALLQVWIPPLNVRGGRDAIILLTCAIHPELVFDITKLLLAILGPLM
VLQAGLTRVPYFVRAQGLIRACMLVRKVAGGHYVQMALMKLAALTGTYVYDHLAPLRDWA
HTGLRDLAVAVEPVVFSDMETKVITWGADTAACGDIILGLPVSARRGEEIFLGPADGLEE
QGWRLLAPITAYSQQTRGLLGCIITSLTGRDKNQVEGEVQVVSTATQSFLATCVNGVCWT
VYHGAGSKTLAGPKGPITQMYTNVDQDLVGWQAPPGARSLTPCTCGSSDLYLVTRHADVI
PVRRRGDSRGSLLSPRPVSYLKGSSGGPLLCPSGHAVGIFRAAVCTRGVAKAVDFVPVES
METTMRSPVFTDNSSPPAVPQTFQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAA
TLGFGAYMSKAHGVDPNIRTGVRTITTGAPITYSTYGKFLADGGCSGGAYDIIICDECHS
TDATSILGIGTVLDQAETAGARLVVLATATPPGSVTVPHPNIEEVALSNIGEIPFYGKAI
PIETIKGGRHLIFCHSKKKCDELAAKLSSLGLNAVAYYRGLDVSVIPTSGDVVVVATDAL
MTGYTGDFDSVIDCNTCVTQTVDFSLDPTFTIETTTVPQDAVSRSQRRGRTGRGRGGIYR
FVTPGERPSGMFDSSVLCECYDAGCAWYELTPAETSVRLRAYLNTPGLPVCQDHLEFWES
VFTGLTHIDAHFLSQTKQAGENFPYLTAYQATVCARAQAPPPSWDQMWKCLIRLKPTLHG
PTPLLYRLGAVQNEVTLTHPITKYIMACMSADLEVVTSTWVLVGGVLAALAAYCLTTGSV
VIVGRIILSGKPAIIPDREVLYQEFDEMEECATHLPYIEQGMQLAEQFKQKALGLLQTAT
KQAEAAAPVIESKWRALETFWAKHMWNFISGIQYLAGLSTLPGNPAIASLMAFTASITSP
LTTQHTLLFNILGGWVAAQLAPPSAASAFVGAGIAGAAVGSIGLGKVLVDILAGYGAGVA
GALVAFKIMSGEAPSTEDLVNLLPAILSPGALVVGVVCAAILRRHVGPGEGAVQWMNRLI
AFASRGNHVSPTHYVPESDAAARVTQILSSLTITQLLKRLHQWINEDCSTPCSGSWLRDV
WDWICTVLTDFKTWLQSKLLPRLPGVPFLSCQRGYKGVWRGDGIMQTTCPCGAQIAGHVK
NGSMRIVGPKTCSNTWHGTFPINAYTTGPCTPSPAPNYSRALWRVAAEEYVEVTRVGDFH
YVTGMTTDNIKCPCQVPAPEFFTEVDGVRLHRYAPACKPLLREEVTFQVGLNQYLVGSQL
PCEPEPDVTVLTSMLTDPSHITAETARRRLARGSPPSLASSSASQLSAPSLKATCTTRHD
SPDADLIEANLLWRQEMGGNITRVESENKVVILDSFDPLRAEEDEREVSVPAEILRKTRK
FPPAMPIWARPDYNPPLLESWKDPDYVPPVVHGCPLPPTKAPPIPPPRRKKTVVLTESTV
SSALAELATKTFGSSGSSAVDSGTATAPPDQPSDDGDKESDDESYSSMPPLEGEPGDPDL
SDGSWSTVSEEASEDVVCCSMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATT
SRSASQRQKKVTFDRLQVLDDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSARSKF
GFGAKDVRNLSSKAVRHIRSVWKDLLEDTETPIDTTIMAKNEVFCVQPEKGGRKPARLIV
FPDLGVRVCEKMALYDVVSTLPQAVMGSSYGFQYSPGQRVEFLVNAWKSKKCPMGFAYDT
RCFDSTVTENDIRVEESIYQCCDLAPEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRA
SGVLTTSCGNTLTCYLKATAACRAAKLQDCTMLVCGDDLVVICESAGTQEDAASLRVFTE
AMTRYSAPPGDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR
HTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGACYSIEPLDLPQ
IIQRLHGLSAFSLHSYSPGEINRVASCLRKLGVPPLRVWRHRARSVRAKLLSQGGRAATC
GKYLFNWAVRTKLKLTPIPAASQLDLSSWFVAGYSGGDIYHSVSHARPRWALFCLLLLSV
GVGIYLLPNR
Download sequence
Identical sequences A8DF17
A8DF17_9HEPC

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