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Domain assignment for A8DFB2_9HEPC from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A8DFB2_9HEPC
Domain Number 1 Region: 2422-2983
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.73e-141
Family RNA-dependent RNA-polymerase 0.00000000000000297
Further Details:      
 
Domain Number 2 Region: 1027-1212
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 5.58e-107
Family Viral proteases 0.0000000187
Further Details:      
 
Domain Number 3 Region: 1346-1646
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.31e-57
Family RNA helicase 0.0000000000611
Further Details:      
 
Domain Number 4 Region: 1220-1351
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.49e-26
Family RNA helicase 0.000000395
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A8DFB2_9HEPC
Sequence length 3011
Comment AC=A8DFB2; DE=RecName: Full=Genome polyprotein; OS=Hepatitis C virus subtype 1a. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; OC=Hepacivirus.
Sequence
MSTNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRG
RRQPIPKARRPEGRTWAQPGYPWPLYGNEGCGWAGWLLSPRGSRPSWGPTDPRRRSRNLG
KVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLA
LLSCLTVPASAYQVRNSTGLYHVTNDCPNSSIVYETADAILHTPGCVPCVREGNVSRCWV
AMTPTVATRDGRLPTTQLRRHIDLLVGSATLCSALYVGDLCGSVFLVGQLFTFSPRHHWT
TQGCNCSIYPGHITGHRMAWDMMMNWSPTTALVVAQLLRIPQAIMDMIAGAHWGVLAGIA
YFSMVGNWAKVLVVLLLFAGVDAGTRVTGGTAAHNAAGLSSLFTFGAKQNIQLVNTNGSW
HINRTALNCNDSLQTGWIAGLIYHHKFNSSGCPERLASCRPLTDFAQGWGPISYANGSGP
DQRPYCWHYPPRPCGIVPAKSVCGPVYCFTPSPVVVGTTDRSGAPTYSWGENDTDVFVLN
NTRPPLGNWFGCTWMNSSGFTKVCGAPPCVIGGVGNNTLRCPTDCFRKHPEATYSRCGSG
PWITPRCIVNYPYRLWHYPCTINYTMFKVRMYVGGVEHRLDAACNWTRGERCDLEDRDRS
ELSPLLLSTTQWQVLPCSFTTLPALSTGLIHLHQNIVDVQYLYGVGSSIASWAIKWDYVV
LLFLLLADARVCSCLWMMLLISQAEAALENLVVLNAASLAGTHGLASFLVFFCFAWYLKG
KWVPGAVYAFYGMWPLLLLLLALPQRAYALDTEVAASCGGVVLVGLMALTLSPYYKRYIS
WCLWWLQYFLTRVEAQLHVWVPPLNVRGGRDAVILLMCVVHPILIFDITKLLLAVFGPLW
ILQASLLKVPYFVRVQGLLRICALARKMAGGHYVQMAIIKLGALTGTYVYNHLTPLRDWA
HNGLRDLAVAVEPVVFSQMETKLITWGADTAACGDIINGLPVSARRGQEILLGPADGMVS
KGWRLLAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTAAQTFLATCINGVCWT
VYHGAGTRTIASPKGPVIQMYTNVDKDLVGWPAPQGARSLTPCTCGSSDLYLVTRHADVI
PVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHAVGIFRAAVCTRGVAKAVDFIPVEN
LETTMRSPVFTDNSSPPAVPQSFQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAA
TLSFGTYMSKAHGIDPNIRTGVRTITTGSPITYSTYGKFLADGGCSGGAYDIIICDECHS
TDATSILGIGTVLDQAETAGARLVVLATATPPGSVTVPHPNIEEVALSTTGEIPFYGKAI
PLEAIKGGRHLIFCHSKKKCDELAAKLVAMGINAVAYYRGLDVSVIPTSGDVVVVATDAL
MTGYTGDFDSVIDCNTCVTQTVDFSLDPTFTIETTTLPQDAVSRTQRRGRTGRGKPGIYR
FVTPGERPSGMFDSSVLCECYDAGCAWYELTPAETTVRLRAYMNTPGLPVCQDHLEFWEG
VFTGLTHIDAHFLSQTKQSGENFPYLVAYQATVCARAQAPPPSWDQMWKCLIRLKPTLHG
PTPLLYRLGAVQNEVTLTHPITKYIMTCMSADLEVVTSTWVLVGGVLAALAAYCLSTGCV
VIVGRIVLSGKPAIIPDREVLYREFDEMEECSQHLPYIEQGMMLAEQFKQKALGLMQTAS
RQAEVIAPAVQTNWQKLEAFWAKHMWNFISGIQYLAGLSTLPGNPAIASLMAFTAAVTSP
LTTSQTLLFNILGGWVAAQLAAPGAATAFVGAGLAGAAVGSVGLGKVLVDILAGYGAGVA
GALVAFKIMSGEVPSTEDLVNLLPAILSPGALVVGVVCAAILRRHVGPGEGAVQWMNRLI
AFASRGNHVSPTHYVPESDAAARVTAILSSLTVTQLLRRLHQWISSECTTPCSGSWLRDI
WDWICEVLSDFKTWLKAKLMPQLPGIPFVSCQRGYRGVWRGDGIMHTRCHCGAEITGHVK
NGTMRIVGPRTCRNMWNGTFPINAYTTGPCTPLPAPNYTFALWRVSAEEYVEIRQVGDFH
YVTGMTTDNLKCPCQVPSPEFFTELDGVRLHRFAPPCKPLLREEVSFRVGLHEYPVGSQL
PCEPEPDVAVLTSMLTDPSHITAEAASRRLARGSPPSMASSSASQLSAPSLKATCTTNHD
SPDAELIEANLLWRQEMGGNITRVESENKVVVLDSFDPLVAEEDEREISVPAEILRKSRR
FAQALPVWARPDYNPPLLETWKKPDYEPPVVHGCPLPPPQSPPVPPPRKKRTVVLTESTV
STALAELATKTFGSSSTSGITGDNTTTSSELASSGCPPDSDAESCSSMPPLEGEPGDPDL
SDGSWSTVSSGADTEDVVCCSMSYTWTGALITPCAAEEQKLPINALSNSLLRHHNLVYST
TSRSACQRQKKVTFDRLQVLDNHYQDVLKEVKAAASKVKANLLSVEEACSLTPPHSARSK
FGYGAKDVRCHARKAVNHINSVWKDLLEDSVTPIDTTIMAKNEVFCVQPEKGGRKPARLI
VFPDLGVRVCEKMALYDVVSKLPIAVMGSSYGFQYSPGQRVEFLVQAWKSKKTPMGFSYD
TRCFDSTVTESDIRTEEAIYQCCDLDPQARVAIKSLTERLYVGGPLTNSRGENCGYRRCR
ASGVLTTSCGNTLTCYIKAQAACRAAGLRDCTMLVCGDDLVVICESEGVQEDAASLRAFT
EAMTRYSAPPGDPPQPEYDLELITSCSSNVSVAHDGAGKRVYYLTRDPTTPLARAAWETA
RHTPVNSWLGNIIMFAPTLWARMILMTHFFSVLIARDQLEQALDCEIYGACYSIEPLDLP
PIIQRLHGLSAFSLHSYSPGEINRVAACLRKLGVPPLRAWRHRARSVRARLLSRGGRAAI
CGKYLFNWAVRTKLKLTPIAAASRLDLSGWFTAGYSGGDIYHSVSHARPRWFWFCLLLLT
AGVGIYLLPNR
Download sequence
Identical sequences A8DFB2
A8DFB2_9HEPC

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