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Domain assignment for B0B399_9HEPC from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  B0B399_9HEPC
Domain Number 1 Region: 1-185
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.06e-91
Family Viral proteases 0.000000152
Further Details:      
 
Domain Number 2 Region: 320-620
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.08e-53
Family RNA helicase 0.000000000414
Further Details:      
 
Domain Number 3 Region: 194-325
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.66e-23
Family RNA helicase 0.000000958
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) B0B399_9HEPC
Sequence length 685
Comment AC=B0B399; DE=SubName: Full=NS3/4A protein; Flags: Fragment; GN=Name=NS3/4A; OS=Hepatitis C virus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; OC=Hepacivirus.
Sequence
APITAYTQQTRGLLGTIVTSLTGRDKNVVTGEVQVLSTATQTFLGTTVGGVMWTVYHGAG
SRTLAGVKRPALQMYTNVDQDLVGWPAPPGAKSLEPCACGSADLYLVTRDADVIPARRRG
DSTASLLSPRPLACLKGSSGGPVMCPSGHVAGIFRAAVCTRGVAKALQFIPVETLSTQAR
SPSFSDNSTPPAVPQSYQVGYLHAPTGSGKSTKVPAAYVAQGYNVLVLNPSVAATLGFGS
FMSRAYGIDPNIRTGNRTVTTGAKLTYSTYGKFLADGGCSGGVYDVIICDECHAQDATSI
LGIGTVLDQAETAGVRLTVLATATPPGSITVPHSNIEEVALGSEGEIPFYGKAIPMAQLK
GGRHLIFCHSKKKCDEIASKLRGMGLNAVAYYRGLDVSIIPTAGDVVVCATDALMTGFTG
DFDSVIDCNVAVEQYVDFSLDPTFSIETRTAPQDAVSRSQRRGRTGRGRLGTYRYVTPGE
RPSGMFDSAVLCECYDAGCSWYDLQPAETTVRLRAYLSTPGLPVCQDHLDFWESVFTGLT
HIDAHFLSQTKQQGLNFSYLTAYQATVCARAQALPPSWDETWKCLVRLKPTLHGPTPLLY
RLGPIQHEICLTHPVTKYIMACMSADLEVTTSTWVLLGGVLAALAAYCLSVGCVVIVGHI
ELGGKPALVPDKEVLYQQYDEMEEC
Download sequence
Identical sequences B0B399
B0B399_9HEPC

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