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Domain assignment for B0B3L4_9HEPC from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  B0B3L4_9HEPC
Domain Number 1 Region: 1-185
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 4.5e-92
Family Viral proteases 0.000000148
Further Details:      
 
Domain Number 2 Region: 320-620
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 9.93e-53
Family RNA helicase 0.000000000372
Further Details:      
 
Domain Number 3 Region: 194-325
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.53e-24
Family RNA helicase 0.000000933
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) B0B3L4_9HEPC
Sequence length 685
Comment AC=B0B3L4; DE=SubName: Full=NS3/4A protein; Flags: Fragment; GN=Name=NS3/4A; OS=Hepatitis C virus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; OC=Hepacivirus.
Sequence
APITAYTQQTRGLLGTIVTSLTGRDKNVVTGEVQVLSTATQTFLGTTVGGVMWTVYHGAG
SRTLAGAKHPALQMYTNVDQDLVGWPAPPGAKSLEPCACGSADLYLVTREADVIPARRRG
DSTASLLSPRPLACLKGSSGGPVMCPSGHVAGIFRAAVCTRGVAKALQFIPVETLSTQAR
SPSFSDNSTPPAVPQSYQVGYLHAPTGSGKSTKVPAAYVAQGYNVLVLNPSVAATLGFGS
FMSRAYGIDPNIRTGNRTVTTGAKLTYSTYGKFLADGGCSGGAYDVIICDECHAQDATSI
LGIGTVLDQAETAGVRLTVLATATPPGSITVPHSNIEEVALGSEGEIPFYGKAIPIALLK
GGRHLVFCHSKKKCDEMASRLRGMGLNAVAYYRGLDVSVIPTTGDVVVCATDALMTGFTG
DFDSVIDCNVAVEQYVDFSLDPTFSIETRTAPQDAVSRSQRRGRTGRGRLGTYRYVTPGE
RPSGMFDSVVLCECYDAGCSWYDLQPAETTVRLRAYLSTPGLPVCQDHLDFWESVFTGLT
HIDAHFLSQTKQQGLNFSYLTAYQATVCARAQAPPPSWDETWKCLVRLKPTLHGPTPLLY
RLGPVQNEICLTHPVTKYIMACMSADLEVTTSTWVLLGGVLAALAAYCLSVGCVVIVGHI
ELGGKPALVPDKEVLYQQYDEMEEC
Download sequence
Identical sequences B0B3J5 B0B3J8 B0B3J9 B0B3L2 B0B3L4
B0B3J5_9HEPC B0B3J8_9HEPC B0B3J9_9HEPC B0B3L2_9HEPC B0B3L4_9HEPC

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