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Domain assignment for A0MWC6_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0MWC6_9PICO
Domain Number 1 Region: 1715-2175
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 9.89e-114
Family RNA-dependent RNA-polymerase 0.0000163
Further Details:      
 
Domain Number 2 Region: 33-278
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 8.97e-51
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0039
Further Details:      
 
Domain Number 3 Region: 300-539
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 4.61e-50
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0046
Further Details:      
 
Domain Number 4 Region: 556-756
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 2.2e-29
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.038
Further Details:      
 
Domain Number 5 Region: 1514-1700
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.4e-28
Family Viral cysteine protease of trypsin fold 0.025
Further Details:      
 
Domain Number 6 Region: 1149-1356
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000623
Family RecA protein-like (ATPase-domain) 0.048
Further Details:      
 
Weak hits

Sequence:  A0MWC6_9PICO
Domain Number - Region: 927-1042,1072-1167
Classification Level Classification E-value
Superfamily ARM repeat 0.0403
Family PBS lyase HEAT-like repeat 0.067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0MWC6_9PICO
Sequence length 2179
Comment AC=A0MWC6; DE=SubName: Full=Polyprotein; OS=Human parechovirus 1. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Parechovirus.
Sequence
METIKSIADMATGVVSSVDSTINAVNERVENVGNEIGGNLLTKVADDASNVLGPNCYATT
AEPENKDVVQATTTVNTTNLTQHPSAPTMPFTPDFSNVDTFHSMAYDITTGEKNPSKLVR
LETHEWTPTWARGHQITHVELPKVFWDKNSKPAYGQSRYFAAVRCGFHFQVQVNVNQGTA
GSALVVYEPKPVVTYDSKLEFGAFTNLPHVLMNLAETTQADLCIPYVADTNYVKTDSSDL
GQLKVYVWTPLSIPSGSATQVDVTILGSLLQLDFQNPRVFGQDVGIYDNAPTRKQNLKKI
LTMSTKYKWTRGKIDIAEGPGSMNMANVLSTTAAQSIALVGERAFYDPRTAGSKSRFDDL
VKISQLFSVMSDSTTPSANHGIDAKGYFTWSSTTAPQSVVHRNIVYLKLFPNLNVFVNSY
SYFRGSIVLRLSVYASTFNRGRLRMGFFPNATEDSTSEIDNAIYTICDLGSDNSFEITIP
YSFSTWMRKTDGHPIGLFQIEVLNRLTYNSSSPNEVYCIVQGKMGQDARFFCPTGSVVTF
QNSWGSQMDLTDPLCLEESAEECKQTISPNELGLTSAQDDGPLGDNKPNYFLNFKSMNVD
IFTVSHTKVDNLFGRAWFYKEHTFTNEGQWRINLEFPKQGHGSLSLLFAYFTGELNIHVL
FLAERGFLRVAHTYDTSENRVNFLSSNGVITIPAGEQMTLSAPYYSNKPLRTVRDNNSLG
YLMCKPFLTGTTTGKIEVYLSLRCPNFFFPLPAPKVSTSRALRGDLANFSDQSPYDQQPQ
SQIMKLAYLNRGFYKHYGIIVGDSVYQLDSDDIFKTALTGKAKFTKTKLTPDWVIEEECE
LDYFRVKYLESSVNSEHIFSVDHNCETIAKDIFGTHTLSQHQAIGLIGTILLTAGLMSTI
KTPVTATTIKEFFNHAVEGDEQGLSLLVQKCTTFFSSAATEILDNDLVKFIVKILVRILC
YMVLYCHKPNILTTACLSTLLIMDVTSSSVLSPSCKALMQCLMDGDVKKLAEVVAESMSN
TDDEEIKEQICDTVKYTKSILSNQGPFKGFNEVSTAFRHIDWWVHTLLKIKDMVLSVFKP
SMESKAIQWLERNKEHVCAILDYASDIIVESKDQTKMKSQEFYQKYTDCLSKFKPIMAIC
FRSCHNSISNTVYRLFQELARIPSRISTQNDLIRVEPIGIWIQGEPGQGKSFLTHTLSKQ
LQKSCKLNGVYTNPTASEFMDGYDNQDIHLIDDLGQTRKEKDIEMLCNCISSVPFIVPMA
HLEEKGKFYTSKLVIATTNKSDFSSTVLQDSGALKRRFPYIMHIRAAKAYSKAGKLNVSQ
AMSTMATGECWEVSKNGRDWETLKLKDLVQKITEDYQGRQKNYDCWKQQLENQTLDDLDD
AVSYIKHNFPDAIPYIDEYLNIEMSTLIEQMEAFIEPRPSVFKCFATKIANQTKRAAKEV
VEWFSAKIKSMLSFVERNKAWLTVVSAVTSAISILLLVTKIFRKEDSKDERAYNPTLPVT
KPKGAFPVSQREFKNEAPYDGQLEHIISQMAYITGSTTGHLTHCAGYQHDEVILHGHSIK
YLEQEEDLTLHYKNKVFPIENPSVTQVTLGGKPMDLAILKCKLPFRFKKNSKYYTNKIGT
ESMLIWMTEQGIITKEVQRVHHSGGIKTREGTESTKTISYTVKSCKGMCGGLLISKVEGN
FKILGMHIAGNGEMGVAIPFNFLKNDISDQGIVTEITPIQPMYINTKTQIHKSPVYGAVE
VKMGPAVLSKSDPRLEEPVECLIKKSASKYRVNKFQVNSELWQGVKACVKSKFREIFGIN
GIVDMKTAVLGTSHVNSMDLSTSAGYSFVKSGYKKKDLICLEPFSVSPMLEKLVQDKFHA
LLKGNQITTIFNTCLKDELRKLDKISTGKTRCIEACEVDYCIVYRMIMMEIYDKIYQTPC
YYSGLAVGINPYKDWHFMINALNDYNYEMDYSQYDGSLSSMLLWEAVEVLAYCHDSPDLV
MQLHKPVIDSDHVVFNERWLIHGGMPSGSPCTTVLNSICNLMMCIYTTNLISPGIDCLPI
VYGDDVILSLDKEIDPEKLQSVMADSFGAEVTGSRKDEPPSLKPRLEVEFLKRKPGYFPE
STFIVGKLDTENMIQHLMWMKNFSTFKQQLQSYLMELCLHGKDTYQHYIKILDPYLKEWN
ITVDDYDVVIARLMPMVFD
Download sequence
Identical sequences A0MWC6
A0MWC6_9PICO

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