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Domain assignment for A5D6P1_9CALI from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A5D6P1_9CALI
Domain Number 1 Region: 143-496
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 1.91e-78
Family Caliciviridae-like VP 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A5D6P1_9CALI
Sequence length 668
Comment AC=A5D6P1; DE=SubName: Full=Capsid protein; OS=Feline calicivirus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Caliciviridae; OC=Vesivirus.
Sequence
MCSTCANVLKYYGWDPHIRLIINPNKFLPVGFCDNPLMCCYPELLPEFGTVWDCNQSPLQ
IYLESILGDDEWESTYEAVDPVVPPMHWDEAGKIFQPHPGVLMRHIIGEVAKAWDPNLPL
FRLEADDSSITAPEQGTMVGGVIAEPSAQMSTAADMATGKSVDSEWEAFFSFHTSVNWST
SETQGKILFKQSLGPLLNPYLEHLAKLYVAWSGSIEVRFSISGSGVFGGKLAAIVVPPGV
DPVQCTSMLQYPHVLFDARQVEPVIFSIPDLRSTLYHLMSDTDTTSLVIMVYNDLINPYA
NDSNSSGCIVTVETKPGPDFKFHLLKPPGSVLTHGSVPSDLIPKSSSLWIGNRYWTDITD
FVIRPFVFQANRHFDFNQETAGWSTPRFRPITITISEKDGTKLGIGVATDYIVPGIPDGW
PDTTISEELIPAGDYAITNGAGNDIVTAREFDTADEIKNNTNFRGMYICGSLQRAWGDKK
ISNTAFITTATVDGNKLFPSNTIDQTKIAVFQDNHVGSEVQTSDDTLALLGYTGVGEEAI
GAIREKVVRISTLPEVGARGGNHPIFYKNSIKLGYVIRSIDVFNSQILHTSRQLSLNHYL
LSPDSFAVYRIIDSNGSWFDIGIDSDGFSFVGVSSMESSSFLSLPPCMGIQLAKIRLAST
IRSTMTRL
Download sequence
Identical sequences A5D6P1
A5D6P1_9CALI

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