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Domain assignment for A5LGG1_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A5LGG1_9PICO
Domain Number 1 Region: 1719-2178
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.18e-113
Family RNA-dependent RNA-polymerase 0.0000188
Further Details:      
 
Domain Number 2 Region: 18-283
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 1.52e-52
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0019
Further Details:      
 
Domain Number 3 Region: 281-538
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 4.92e-46
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0054
Further Details:      
 
Domain Number 4 Region: 556-755
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 8.66e-29
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.051
Further Details:      
 
Domain Number 5 Region: 1517-1703
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 6.18e-28
Family Viral cysteine protease of trypsin fold 0.02
Further Details:      
 
Domain Number 6 Region: 1153-1308
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000473
Family RecA protein-like (ATPase-domain) 0.086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A5LGG1_9PICO
Sequence length 2182
Comment AC=A5LGG1; DE=SubName: Full=Polyprotein; OS=Human parechovirus 6. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Parechovirus.
Sequence
METIKSIADMATGITKTVDSTINSVNETIGNTDNASGGDILTRVADDASNVLGPNCYATT
SEPANKDVVQATTTVNTTNLTQHPSAPTMPFTPDFANVDNFHSMAYDITSGDKNPSKLIR
LETGDWTLTAKRSDKIMHVELPKAFWNEQRKPAYGQAKYFAAVRCGFHFQVQINVNQGAA
GSALVVYMPKPVVDHETKMEFGAFTNLPHVLMNLAETTQADLCIPYVSDTNYVMTDSSDL
GHLRVYVWTPLSMPTGITTQVDVTVLGSLLQLDFQNPRPYNKQVNIYDNGPTKMISKKKI
LTMSTKYKWTRNKFDIAEGPGSMNMANVLSTTGAQSVALVGERAFYDPRSAGSRSRFDDL
VKITQLFSVMADSDTPSTTYGHDAKGYFKWSAITNPMYIVHRNIVYLRLFPNINNFVNSF
SYFRGSLVLRLNVYASTFNRGRLRMGFFPNASEDTDEELDNAIYTICDIGSDNSFEITIP
YSFSTWMRKTAGHPIGLLQIEVLNRLTYNSSSPSEVFCILQGRMGEDAKFFCPTGSIVTF
QNSWGSQMGLSDPLCIEDDAENCKQTISPNELGLTSAQDDGPLGGEKPNYFLNFRTMNVD
IFTVSHTKVDNIFGRAWFVTSHDFNNEGQWPLNLTFPFEGHGSLSLLFAYFTGELNIHVL
FLSGKGFLRVVHTYDTADNRLTNLASNGVITIPAGEQMSLSAPFYSHKPLRTVRDTHSLG
RLICKPFLTGTTSGRIEVYMSLRCPNFFFPVPAPKNTPRSQSRALRGDMANLTNQSPYDQ
QPRNQVMKLAYLDRGFYKHYGIIVGEHVYQLDSDDIFKTALTGKAKFTKTRLTSEWIVEE
ECELDYFRIKYLESAVNSEHIFSVDKNCETIAKDIFGTHTLSQHQAIGLIGTILLTAGLM
STIKTPVNTTTIKEFFNHAIEGDEQGLSLLVQKCTTFFSSAATEILDNDLVKFIIKILVR
ILCYMVLYCHKPNILTTACLSTLLIMDVTSSSVLSPSCKALMQCLMDGDVKKLAEVVAES
MSNTDDDEIKEQICDTVKYTKTILSNQGPFKGFNEVSTAFRHIDWWIHTLLKIKDMVLSV
FKPSLESKAIQWLERNKEHVCGILDYASDIIVESKDQSKVKTQDFYQRYSDCLSKFKPIM
AICFRSCHNSISNTVYRLFQELARIPNRISTNNDLIRIEPIGIWIQGEPGQGKSFLTHTL
SRQLQKSCKLNGVFTNPTASEFMDGYDNQDIHLIDDLGQTRKEKDIEMLCNCISSVPFIV
PMAHLEEKGKFYTSKLVIATTNKSDFSSTVLQDSGALKRRFPYIMHIRAAKAYSKAGKLN
VSQAMAVMSTGECWEVSKNGRDWETLKLKELVDKIAIDYNERVNNYNAWKQQLENQTLDD
LDDAVSYIKHNFPDAIPYIDEYLNIEMSTLIEQMEAFIEPKPSVFKCFANKIGSKISKAS
KGVVDWFSSKIKSMLSFVERNKAWLTVVSAVTSAISILLLVTKIFKKEESKDERAYNPTL
PATKPKGAFPVTQREFKNEAPYDGQLEHIISQMAYITGSTTGHLTHCAGYQHDEIILHGH
SIKYLEQEEELTLHYKNKVFPIEQPSVTQVTLGGKPMDLAILKCKLPFRFKKNSKYYTNK
IGTESMLIWMTEQGIITKEVQRVHHSGGIKTREGTESTKTISYTVKSCKGMCGGLLISKV
EGNFKILGMHIAGNGEMGVAIPFNFLKNDMSDQGIITDVTPIQPMYINTKTQIHKSPVYG
AVEVKMGPAVLSKSDPRLEEPVECLIKKSAAKYRVNKFQVNNELWQGVKACVKSKFREIF
GVNGIVDMKTAILGTSHVNSMDLSTSAGYSFVKSGYKKKDLICLEPFSVSPMLEKLVQDK
FHNLLKGNQITTIFNTCLKDELRKLDKIASGKTRCIEACEVDYCIVYRMIMMEIYDKIYQ
TPCYYSGLAVGINPYKDWHFMINALNDYNYEMDYSQYDGSLSSMLLWEAVEVLAYCHDSP
DLVMQLHKPVIDSDHIVFNERWLIHGGMPSGSPCTTVLNSLCNLMMCIYTTNLISPGIDC
LPIVYGDDVILSLDKEIEPERLQSIMAESFGAEVTGSRKDEPPSLKPRMEVEFLKRKPGY
FPESTFIVGKLDTENMIQHLMWMKNFSTFKQQLQSYLMELCLHGKDIYQHYIKILDPYLK
EWNIIVDDYDVVIAKLMPMVFD
Download sequence
Identical sequences A5LGG1
A5LGG1_9PICO

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