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Domain assignment for A6Y878_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A6Y878_9PICO
Domain Number 1 Region: 1874-2335
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 9.39e-125
Family RNA-dependent RNA-polymerase 0.0000000000000228
Further Details:      
 
Domain Number 2 Region: 31-202
Classification Level Classification E-value
Superfamily Cysteine proteinases 5.79e-88
Family FMDV leader protease 0.0000000194
Further Details:      
 
Domain Number 3 Region: 543-919
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 3.92e-81
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.000000113
Further Details:      
 
Domain Number 4 Region: 204-505
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 2.57e-66
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.00000000684
Further Details:      
 
Domain Number 5 Region: 1659-1837
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 2.8e-46
Family Viral cysteine protease of trypsin fold 0.0000000279
Further Details:      
 
Domain Number 6 Region: 1108-1344
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000532
Family Nitrogenase iron protein-like 0.066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A6Y878_9PICO
Sequence length 2336
Comment AC=A6Y878; DE=SubName: Full=Polyprotein; OS=Foot-and-mouth disease virus - type A. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Aphthovirus.
Sequence
MNTTDCFIALLQAFREIKTLILSRAQQKRTMEFTLHNGEKKTFFSRPNNHDNCWLNTILQ
LFRYVDEPFFDWVYDSPENLTLKAIQQLEEITGLELHEGGPPALVIWNIKHLLNTGIGTA
SRPSEVCMVDGTDMCLADFHAGIFLKGQEHAVFACVTSNGWYAIDDEDFYPWTPDPSDVL
VFVPYDQEPLNGEWKAKVQKRLRGAGQSSPATGSQNQSGNTGSIINNYYMQQYQNSMDTQ
LGDNAISGGSNEGSLTYFPHTTNTQNNDWFSKLASSAFSGLFGALLADKKTEETTLLEDR
ILTTRNGHTTSTTQSSVGVTYGYSTGEDHVSGPNTSGLETRVVQAERFFKKYLFDWTTDK
AFGHLEKLELPTEHKGVYGHLVDSFAYMRNGWDVEVTAVGNQFNGGCLLVAMVPEWKEFT
PREKYQLTLFPHQFINPRTNMTGPHHGPVPWCQVGMTKYKQHKPWTLVVMVVSPLTTSSI
GASQIKVYANIAPTFVHVAGELPSKEGIVPVACSDGYGGLVTTDPKTADPVYGMVYNPPR
TNYPGRFTNLLDVAEACPTFLCFDDGKPYVVTRTDDQRLLAKFDVSLAAKHMSNTYLSGI
AQYYTQYSGTINLHFMFTGSTESKARYMVAYIPPGMDTPPDTPEKAAHCIHAEWDTGLNS
KFTFSIPYVSAADYAYTASDVAETTNVQGWVCIYQITHGKAEQDTLVVSVSAGKDFELRL
PIDPRTQTTTAGESADPVTTTVENYGGETQARRRQHTDVGFIMDRFVKISPGSPTHVIDL
MQTHQHALVGALLRAATYYFSDLEIVVRHDGNLTWVPNGAPVEALANTSNPTAYHKQPFT
RLALPYTAPHRVLATVYNGVSKYSTTGGGRRGDLGPLAARVATQLPSSFNFGAIRATTIH
ELLVRMKRAELYCPRPLLTVEVLSQDRHKQKIIAPAKQLLNFDLLKLAGDVESNPGPFFF
SDVRTNFSKLVDTINQMQEDMSTKHGPDFNRLVTAFEELATGVKAIRTGLDEAKPWYKLI
KLLSRLSCMAAVAARSKDPVLVAIMLADTGLEILDSTFVVKKISDSLSSLFHVPAPVFSF
GAPILLAGLVKVASNFFRSTPEDLERAEKQLRARDINDIFAILKNGEWLVKLILAIRDWI
KAWIASEEKFVTMTDLVPGILEKQRDLNDPSKYEEAKEWLDNARQACLKSGNVHIANLCK
VVAPAPSKSRPEPVVVCLRGKSGQGKSFLANVLAQAISTHFTGRTDSVWYCPPDPDHFDG
YNQQTVVVMDDLGQNPDGKDFKYFAQMVSTTGFIPPMASLEDKGKPFNSKVIIATTNLYS
GFTPRTMVCPDALNRRFHFDIDVSAKDGYKINNKLDIIKALEDTHTNPVAMFQYDCALLN
GMAVEMKRMQQDVFKPQPPLQNVYQLVQEVIERVELHEKVSSHPIFKQISIPSQKSVLYF
LIEKAQHEAAIEFFEGMVHDSIKEELRPLIQQTSFVKRAFKRLKENFEIVALCLTLLANI
VIMIRETRKRQQMVDDAVNEYIEKANITTDDKTLDEAEKNPQETNSASTVGFRERTLPGH
TVSNDVESEPTVPVEGQPQAEGPYAGPLERQKPLKVRAKLPQQEGPYAGPMERQKPLKVK
AKAPVVKEGPYEGLVKKPVALKVKAKNLIVTESGAPPTDLQKMVMGNTKPVELILDGKTV
AICCATGVFGTAYLVPRHLFAEKYDKIMLDGRAMTDSDYRVFEFEIKVKGQDMLSDAALM
VLHRGNRVRDITKHFRDTARMKKGTPVVGVINNADVGRLIFSGEALTYKDIVVCMDGDTM
PGLFAYRAATKAGYCGGAVLAKDGAETFIVGTHSAGGRVELDTVHVFPGPVLLKMKAHID
PEPHHEGLVIDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNEGVVLDE
VIFSKHKGDTKMSEEDKALFRRCAADYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPD
TAPGLPWALQGKRRGALIDFENGTVGPEVESALKLMEKREYKFACQTFLKDEIRPMEKVR
AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYK
NVWDVDYSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEG
GMPSGCSATSIINTILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFEALK
PHFKSLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYKPVMASKTLEAILSF
ARRGTIQEKLISVAGLAVHSGPDEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDA
Download sequence
Identical sequences A6Y878
A6Y878_9PICO

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