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Domain assignment for B4YYP1_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  B4YYP1_9PICO
Domain Number 1 Region: 1848-2302
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 4.45e-114
Family RNA-dependent RNA-polymerase 0.0000000153
Further Details:      
 
Domain Number 2 Region: 76-409
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 8.92e-101
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0000000000326
Further Details:      
 
Domain Number 3 Region: 449-902
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 4.41e-83
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.000000000214
Further Details:      
 
Domain Number 4 Region: 1641-1832
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.43e-42
Family Viral cysteine protease of trypsin fold 0.0074
Further Details:      
 
Weak hits

Sequence:  B4YYP1_9PICO
Domain Number - Region: 1300-1434
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000253
Family RecA protein-like (ATPase-domain) 0.06
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) B4YYP1_9PICO
Sequence length 2303
Comment AC=B4YYP1; DE=SubName: Full=Polyprotein; OS=Theiler's encephalomyelitis virus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Cardiovirus.
Sequence
MACKHGYPDVCPICTAVDATPNFEYLLMADGEWFPADLLCVDLDDDVFWPSDTSDQFQAM
DWTNVPFIRDIVMEPQGNASSSDKSNSQSSGNEGVIINNFYSNQYQNSIDLSASGGNAGD
APQNSGQLSNILGGAANAFATMAPLLLDQNTEEMENLSDRVASDKAENSATNTQSTVGRL
CGYGKSHHGEHPASCADAATDKVLAAERYYTIDLASWTTSQEAFSHIRIPLPHVLAGEDG
GVFGATLRRHYLCKTGWRVQVQCNASQFHAGSLLIFMAPEFYTGKGTKTGTMEPSDPFTM
DTEWRSPQGAPTGYRYDSRTGFFAMNHQNQWQWTVYPHQILNLRTNTTVDLEVPYVNVAP
SSSWTQHANWTLVVAVLSPLQYATGSSPDVQITASLQPVNPVFNGLRHETVIAQSPIPVT
VREHKGCFYSTNPDTTVPIYGKTISTPSDYMCGEFSDLLELCKLPTFLGNPNSNNKRYPY
FSATNSVPATSMVDYQVALSCSCMANSMLAAVARNFNQYRGSLNFLFVFTGAAMVKGKFL
IAYTPPGAGKPTTRDQAMQSTYAIWDLGLNSSFNFTAPFISPTHYRQTSYTSPTVTSVDG
WVTVWQLTPLTYPSGTPTNSDILTLVSAGDDFTLRMPISPTKWVPQGVDNAEKGKSSNDD
RFGDFVAEPVKLPENQTRVAFFYDRAVPIGMLGPGQNMETTFSYLENDFRLNCLLLTPLP
SFCPDSTSGPVKTKAPVQWRWVRSGGTNGANFPLMTKQDYAFLCFSPFTYYKCDLEVTAS
AIGTDTVSSVLRWAPTGAPADVTDQLIGYTPSLGETRNPHMWIVGSGNSQISFVVPYNSP
LSVLPAAWFNGWSDFGNTKDFGIAPTSDFGRLWIQGNTSVSVRIRYKKMKVFCPRPTLFL
PWPTPTTTKINADNPVPILELENPAALYRIDLFITFTDEFITFDYKVHGRPVLTFRIPGF
GLTPAGRMLVCMGEQPAHGPFTSSKSFYHVIFTATCSSFSFSIYKGRYRSWKKPIHDELV
DRGYTTFGEFFRAVRGYHADYYRQRLIHDVETNPGPVQSVFQPQGAVLTKSLAPQAGIQN
LLLRLLGIDGDCSEVSKAITVVTDLVAVWEKAKTTLVSPEFWSKLILKTTKFIAASVLYL
HNPDFTTTVCLSLMTGVDLLTNDSVFDWLKHKLSSFFRTPPPACPNVLQPQGPLREANEG
FTFAKNIEWAMKTIQSIVNWLTGWFKQEEDHPQSKLDKLLMEFPDHCRNIMDMRNGRKAY
CECTASFKYFDELYNLAVTCKRIPLASLCEKFKNRHDHSVTRPEPVVVVLRGAAGQGKSV
TSQIIAQSVSKMAFGRQSVYSMPPDSEYFDGYENQFSVIMDDLGQNPDGEDFTVFCQMVS
STNFLPNMAHLERKGTPFTSSFIVATTNLPKFRPVTVAHYPAVDRRITFDFTVTAGPHCQ
TPAGMLDIEKAFDEIPGSKPQLACFSADCPLLHKRGVMFTCNRTKAVYNLQQVVKMVNDT
ITRKTENVKKMNSLVAQSPPDWQHFENILTCLRQNNAALQDQLDELQEAFAQARERSDFL
SDWLKVSAIIFAGIASLSAVIKLASKFKESIWPTPVRVELSEGEQAAYAGRARAQKQALH
VLDIQGGGKVLAQAGNPVMDFELFCAKNIVAPITFYYPDKAEVTQSCLLLRAHLFVVNRH
VAETDWTAFKLKDVRHERHTVAIPSVNRSGAETDLTFIKVTKGPLFKDNVNKFCSNKDDF
PARNDTVTGIMNTGLAFVYSGNFLIGNQPVNTTTGACFNHCLHYRAQTRRGWCGSAIICN
VNGKKAVYGMHSAGGGGLAAATIITKELIEAAEKSMLALEPQGSIVDIATGSVVHVPRKT
KLRKTVAHDVFQPKFEPAVLSRYDPRTDKDVDVVAFSKHTTNMESLPSIFDVVCGEYANR
VFTVLGRENGLLTVEQAVLGLPGMDPMEKDTSPGLPYTQQGLRRTDLLDFNTAKMTPQLD
YAHSKLVLGVYDDVVYQSFLKDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKF
QTKPGLELGSAIGTDPDVDWTRYAAELSGFNYVYDVDYSNFDASHSTAMFECLIDNFFTE
QNGFDRRIAEYLRSLAVSRHAYEDRRVLIRGGLPSGCAATSMLNTIMNNVIIRAALYLTY
SNFEFDDIKVLSYGDDLLIGTNYQIDFNLVKERLAPFGYKITPANKTTTFPLTSHLQDVT
FLKRRFVRFNSYLFRPQMDAVNLKAMVSYCKPGTLKEKLMSIALLAVHSGPDIYDEIFLP
FRNVGIVVPTYSSMLYRWLSLFR
Download sequence
Identical sequences B4YYP1
B4YYP1_9PICO

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