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Domain assignment for C1JDX3_9CALI from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  C1JDX3_9CALI
Domain Number 1 Region: 32-376
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 3.45e-54
Family Caliciviridae-like VP 0.00052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) C1JDX3_9CALI
Sequence length 549
Comment AC=C1JDX3; DE=SubName: Full=Capsid protein; OS=Bovine enteric calicivirus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Caliciviridae; OC=Norovirus.
Sequence
MSDNKSSLEQQNESSRAMDAGATGAAAAAPAPPVAAAPASGLVGALVAEPQSGPSTEQWR
TAYTLFGTVSWNANAGPGTILTVGRLGPGMNPYTQHIAAMYGGWAGGMDIRITIAGSGFI
GGTLAVAAIPPGVDPESVNVLRMPHVLIDARGGLPLEVTLEDIRTSLYHPMGDTNTASLV
IAVMTGLINPLGTDTLSVTVQLETRPGRDWVFFSLLPPTAGVASADPSQLLTRVALATSP
EVRFGTGVLGILGLPSNPSVNRVYDVQSRTRGWSFPIPSSSVFMGDARNVEHNRRVMVQS
SAPNNPLSDVFPDGFPDFIPQVDTEPDGGAVIAGQVLPHPGDNDNFWRLTPVVRGNTTAA
INTIPERFNQVYFINLADEEAVSAATEELRFNGIQGIFGQRASARAVQVMQGYVPRAEHI
IRPAGFAGVGPQGPNVPIGFAGTMPNFNATASGADDLVPVWGPTLVHTASLLAGTTYELA
ENSMYVFSVSTSTSTFELGMLANGTWLGPAQLAGTGITWTEVLSVTYMGMRFAYNPLSGQ
GIGGESRRL
Download sequence
Identical sequences C1JDX3
C1JDX3_9CALI

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