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Domain assignment for C1L304_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  C1L304_9PICO
Domain Number 1 Region: 1715-2175
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 5.44e-113
Family RNA-dependent RNA-polymerase 0.000018
Further Details:      
 
Domain Number 2 Region: 33-278
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 9.31e-51
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0039
Further Details:      
 
Domain Number 3 Region: 300-539
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 4.85e-50
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0046
Further Details:      
 
Domain Number 4 Region: 556-756
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 5.18e-29
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.038
Further Details:      
 
Domain Number 5 Region: 1514-1700
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.25e-28
Family Viral cysteine protease of trypsin fold 0.024
Further Details:      
 
Domain Number 6 Region: 1149-1305
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000791
Family Nucleotide and nucleoside kinases 0.096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) C1L304_9PICO
Sequence length 2179
Comment AC=C1L304; DE=SubName: Full=Polyprotein; GN=Name=p123; OS=Human parechovirus type 1 PicoBank/HPeV1/a. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Parechovirus.
Sequence
METIKSIADMATGVVSSVDSTINAVNERVENVGNEIGGNLLTKVADDASNVLGPNCYATT
AEPENKDVVQATTTVNTTNLTQHPSAPTMPFTPDFSNVDTFHSMAYDITTGEKNPSKLVR
LETHEWTPTWARGHQITHVELPKVFWDKNSKPAYGQSRYFAAVRCGFHFQVQVNVNQGTA
GSALVVYEPKPVVTYDSKLEFGAFTNLPHVLMNLAETTQADLCIPYVADTNYVKTDSSDL
GQLKVYVWTPLSIPSGSATQVDVTILGSLLQLDFQNPRVFGQDVGIYDNAPTRKQNLKKI
LTMSTKYKWTRGKIDIAEGPGSMNMANVLSTTAAQSIALVGERAFYDPRTAGSKSRFDDL
VKISQLFSVMSDSTTPSANHGIDAKGYFTWSSTTAPQSVVHRNIVYLKLFPNLNVFVNSY
SYFRGSIVLRLSVYASTFNRGRLRMGFFPNATEDSTSEIDNAIYTICDLGSDNSFEITIP
YSFSTWMRKTDGHPIGLFQIEVLNRLTYNSSSPNEVYCIVQGKMGQDARFFCPTGSVVTF
QNSWGSQMDLTDPLCLEESAEECKQTISPNELGLTSAQDDGPLGDNKPNYFLNFKSMNVD
IFTVSHTKVDNIFGRAWFYQEHTFTDEGQWRVNLEFPKQGHGSLSLLFAYFTGELNIHVL
FLAEKGFLRVAHTYDTSANRVNFLSSNGVITIPAGEQMTLSAPYYSNKPLRTVRDDNSLG
YLMCKPFLTGTTTGKIEVYLSLRCPNFFFPLPAPKVSTSRALRGDLANFSDQSPYDQQPQ
SQIMKLAYLDRGFYKHYGIIVGDSVYQLDSDDIFKTALTGKARFTKTKLTSDWVIEEECE
LDYFRVKYLESSVNSEHIFSVDHNCETIAKDIFGTHTLSQHQAIGLIGTILLTAGLMSTI
KTPVTATTIKEFFNHAIEGDEQGLSLLVQKCTTFFSSAAXEILDNDLVKFIVKILVRILC
YMVLYCHKPNILTTACLSTLLIMDVTSSSVLSPSCKALMQCLMDGDVKKLAEVVAESMSN
TDDEETKEQICDTVKYTKSILSNQGPFKGFNEVSTAFRHIDWWVHTLLKIKDMVLSVFKP
SLESKAIQWLERNKEHVCAILDYASDIIVESKDQTKMKSQEFYQKYTDCLSKFKPIMAIC
FRSCHNSISNTVYRLFQELARIPSRISTQNDLIRVEPIGIWIQGEPGQGKSFLTHTLSRQ
LQKSCKLNGVYTNPTASEFMDGYDNQDIHLIDDLGQTRKEKDIEMLCNCISSVPFIVPMA
HLEEKGKFYTSRLVIATTNKSDFSSTVLQDSGALKRRFPYIMHIRAAKAYSKAGKLNVSQ
AMSTMATGECWEVSKNGRDWETLKLKDLVHKITEDYQERQKNYDCWKQQLENQTLDDLDD
AVSYIKHNFPDAIPYIDEYLTIEMSTLIEPMEAFNEPRPYVFKCFATKVANQTRKAAKEV
VEWFSSKIKSMLSFVERNKAWLTVVSAVTSAISILLLVTKIFKKEDSKDERAYNPTLPVT
KPKGAFPVSQREFKNEAPYDGQLEHIISQMAYITGSTTGHFTHCAGYQHDEVILHGHSIK
YLEQEEDLTLHYKNKVFPIENPSVTQVTLGGKPMDLAILKCKLPFRFKKNSKYYTNKIGT
ESMLIWMTEQGIITKEVQRVHHSGGIKTREGTESTKTISYTVKSCKGMCGGLLISKVEGN
FKILGMHIAGNGEMGVAIPFNFLKNDISDQGIVTEITPIQPMYINTKTQIHKSPVYGAVE
VKMGPAVLSKSDPRLEEPVECLIKKSAAKYRVNKFQVNNELWQGVKACVKSKFREIFGIN
GIVDMKTAVLGTSHVNSMDLNTSAGYSFVKSGYKKKDLICLEPFSVSPMLEKLVQDKFHA
LLKGNQITTIFNTCLKDELRKLDKISTGKTRCIEACEVDYCIVYRMIMMEIYDKIYQTPC
YYSGLAVGINPYKDWHFMINALNDYNYEMDYSQYDGSLSSMLLWEAVEVLAYCHDSPDLV
MQLHKPVIDSDHVVFNERWLIHGGMPSGSPCTTVLNSLCNLMMCIYTTNLISPGIDCLPI
VYGDDVILSLDNEIDPEKLQSVMADSFGAEVTGSRKDEPPSLKPRLEVEFLKRKPGYFPE
STFIVGKLDTENMIQHLMWMKNFSTFKQQLQSYLMELCLHGKDTYQHYIKILDPYLKEWN
ITVDDYDVVIAKLMPMVFD
Download sequence
Identical sequences C1L304
C1L304_9PICO

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