SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for D2E656_9CALI from UniProt viral sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  D2E656_9CALI
Domain Number 1 Region: 25-95
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 1.09e-21
Family Caliciviridae-like VP 0.00024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) D2E656_9CALI
Sequence length 95
Comment AC=D2E656; DE=SubName: Full=Capsid; Flags: Fragment; OS=Norovirus Hu/GII/Seoul0540/2007/KR. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Caliciviridae; OC=Norovirus.
Sequence
MKMASNDASPSDGSAANLVPEVNNEVMALEPVVGAAIAAPVAGQQNVIDPWIRNNFVQAP
GGEFTVSPRNAPGEILWSAPLGPDLNPYLSHLARM
Download sequence
Identical sequences D2DLF3 D2DLF7 D2DLG9 D2DLH3 D2DLH9 D2DLI1 D2DLI5 D2DLI7 D2DLK1 D2DLM1 D2DLM4 D2DLM8 D2DLN0 D2E5V2 D2E5V8 D2E5W0 D2E5W2 D2E5X2 D2E5Y7 D2E610 D2E632 D2E644 D2E652 D2E656
D2DLF3_9CALI D2DLF7_9CALI D2DLG9_9CALI D2DLH3_9CALI D2DLH9_9CALI D2DLI1_9CALI D2DLI5_9CALI D2DLI7_9CALI D2DLK1_9CALI D2DLM1_9CALI D2DLM4_9CALI D2DLM8_9CALI D2DLN0_9CALI D2E5V2_9CALI D2E5V8_9CALI D2E5W0_9CALI D2E5W2_9CALI D2E5X2_9CALI D2E5Y7_9CALI D2E610_9CALI D2E632_9CALI D2E644_9CALI D2E652_9CALI D2E656_9CALI

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]