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Domain assignment for Q45FA1_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q45FA1_9PICO
Domain Number 1 Region: 2-247
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 2.59e-50
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0065
Further Details:      
 
Domain Number 2 Region: 250-489
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 3.38e-49
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0023
Further Details:      
 
Domain Number 3 Region: 507-777
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 6.2e-36
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Q45FA1_9PICO
Sequence length 895
Comment AC=Q45FA1; DE=SubName: Full=Capsid protein P1; Flags: Fragment; OS=Hepatitis A virus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Hepatovirus.
Sequence
MNMSRQGIFQTVGSGLDHILSLADIEEEQMIQSVDRTAVTGASYFTSVDQSSVHTAEVGS
HQIEPLKTSVDKPGSKKTQGEKFFLIHSADWLTTHALFHEVAKLDVVKLLYNEQFAVQGL
LRYHTYARFGIEIQVQINPTPFQQGGLICAMVPGDQSYGSIASLTVYPHGLLNCNINNVV
RIKVPFIYTRGAYHFKDPQYPVWELTIRVWSELNIGTGTSAYTSLNVLARFTDLELHGLT
PLSTQMMRNEFRVSTTENVVNLSNYEDARAKMSFALDQEDWKSDPSQGGGIKITHFTTWT
SIPTLAAQFPFNASDSVGQQIKVIPVDPYFFQMTNSNPDQKCITALASICQMFCFWRGDL
VFDFQVFPTKYHSGRLLFCFVPGNELIDVSGITLKQATTAPCAVMDITGVQSTLRFRVPW
ISDTPYRVNRYTKSAHQKGEYTAIGKLIVYCYNRLTSPSNVASHVRVNVYLSAINLECFA
PLYHAMDVTTQVGDDSGGFSTTVSTEQNVPDPQVSITTMRDLKGKANRGKMDVSGVQAPV
GAITTIEDPVLAKKVPETFPELKPGESRHTSDHMSIYKFMGRSHFLCTFTFNSNNKEYTF
PITLSSTSNPPHGLPSTLRWFFNLFQLYRGPLDLTIIITGATDVDGMAWFTPVGLAVDTP
WVEKESALSIDYKTALGAVRFNTRRTGNIQIRLPWYSYLYAVSGALDGLGDKTDSTFGLV
SIQIANYNHSDEYLSFSCYLSVTEQSEFYFPRAPLNSNAMLSTETMMSRIAAGDLESSVD
DPRSEEDRRFESHIESRKPYKELRLEVRKQRLKYAQEELSNEVLPPPRKMKGLFSQTKIS
LFYTEDHEIMKFSWRGVTADTRALRRFGFSLAAGRSVWTLEMDAGVLTGRLIRLN
Download sequence
Identical sequences Q45FA1
Q45FA1_9PICO

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