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Domain assignment for Q6DUE9_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q6DUE9_9PICO
Domain Number 1 Region: 1741-2164
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.33e-103
Family RNA-dependent RNA-polymerase 0.00000493
Further Details:      
 
Domain Number 2 Region: 2-247
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 7.39e-50
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0067
Further Details:      
 
Domain Number 3 Region: 250-489
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 8.58e-49
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0021
Further Details:      
 
Domain Number 4 Region: 1523-1733
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.81e-42
Family Viral cysteine protease of trypsin fold 0.0000000035
Further Details:      
 
Domain Number 5 Region: 508-777
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 3.68e-35
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0024
Further Details:      
 
Domain Number 6 Region: 1218-1371
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000955
Family Phosphoribulokinase/pantothenate kinase 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Q6DUE9_9PICO
Sequence length 2165
Comment AC=Q6DUE9; DE=SubName: Full=Polyprotein; Flags: Fragment; OS=Hepatitis A virus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Hepatovirus.
Sequence
MNMSRQGIFQTVGSGLDHILSLADVEEEQMIQSVDRTAVTGASYFTSVDQSSVHTAEVGS
HQPEPLKTSVDKPGSKRTQGEKFFLIHSADWLTTHALFHEVAKLDVVKLLYNEQFAVQGL
LRYHTYARFGIEIQVQINPTPFQQGGLICAMVPGDQSYGSIASLTVYPHGLLNCNINNVV
RIKVPFIYTRGAYHFKDPQYPVWELTIRVWSELNIGTGTSAYTSLNVLARFTDLELHGLT
PLSTQMMRNEFRVSTTENVVNLSNYEDARAKMSFALDQEDWKSDASQGGGIKITHFTTWT
SIPTLAAQFPFNASDSVGQQIKVIPVDPYFFQMTNTNPEQKCITALASICQMFCFWRGDL
VFDFQVFPTKYHSGRLLFCFVPGNELIDVSHITLKQATTAPCAVMDITGVQSTLRFRVPW
ISDTPYRVNRYTKSSHQKGEYTAIGKLIVYCYNRLTSPSNVASHVRVNVYLSAINLECFA
PLYHAMDVTTQVGDDSGGFSTTVSTKQNVPDPQVGITTVKDLKGRANQGKMDISGVQAPV
GAITTIEDPVLAKKVPETFPELKPGESRHTSDHMSIYKFMGRSHFLCTFTFNSNNKEYTF
PITLSSTSNPPHGLPSTLRWFFNLFQLYRGPLDLTIIITGATDVDGMAWFTPVGLAVDTP
WVEKESALSIDYKTALGAVRFNTRRTGNIQIRVPWASYPYAVSGALDGLGDKTDSTFGLV
SIQIANYNHSDEYLSFSCYLSVTEQSEFYFPRAPLNTNAMMSSETMMDRIALGDLESSVD
DPRSEEDRKFESHIEKRKPYKELRLEVGKQRLKYAQEELSNEVLPPPRKIKGVFSQAKIS
LFYTEDHEIMKFSWKGITADTRALRRFGFSLAAGRSVWTLEMDAGVLTGRLVRVNDEKWT
EMKDDKIVSLVEKFTSNKHWSKVNFPHGMLDLEEIAANAKEFPNMSETDLCFLLHWLNPK
KINLADRMLGLSGIQEIKEKGVGLIGECRAFLDSITSTLKSMMFGFHHSVTVEIINTVLC
FVKSGILLYVIQQLNQEEHSHIIGLLRVMNYADIGCSVISCGKVFSKMLETVFNWQMDSR
MMELRTQSISNWLRDICSGITIFKSFKDAIYWLYTKIREYYDLNYGNKKDVLNILKDHQQ
KIERAIEEADNFCVLQIQDVEKFEQYQKGVDLIQKLRTVHSMAQVDPGLTVHLAPLRDCI
ARVHQKLKNLGSINQAMVTRCEPVVCYLYGKRGGGKSLTSIALATKICKHYGVEPEKNIY
TKPVASDYWDGYSGQLVCIIDDIGQNTTDEDWSDFCQLVSGCPMRLNMASLEEKGRHFSS
PFIIATSNWSNPSPKTVYVKEAIDRRLHFKVEVKPASFFKNPHNDMLNVNLAKTNDAIKD
MSCVDLVMDNHNVSLSELLSSLVMTVEIRKQNMSEFMELWSQGLSDDDNDSAVAEFFQSF
PSGEPSGSRLSQFFQSVTNHKWVAVGAAVGVLGVLVGGWYVYKHFTKKQEESIPSEGVYH
GVTKPKQVIKLDADPVESQSTLEIAGLVRKNLVQFGVGEKNGCVRWVMNALGIKDDWLLV
PSHAYKFEKDYEMMEFYFNRGGTYYSISAGNVVIQSLDVGFQDVVLMKVPTIPKFRDITE
HFIKKSDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYVHKKNDGTTIDLTVDQAW
RGKGEGLPGMCGGALISSNQSIQNAILGIHVAGGNSILVAKLVTQEMFQNIDKKIVESQR
IMKVEFTQCSMNVVSKTLFRKSPIHHHIDKNMINFPAVMPFSRAEIDPMAVMLSKYSLPI
VDEPDDYKDVSVFFQNKILGKSPLVDDFLDIEMAITGAPGIDAINMDSSPGYPYVQEKLT
KRDLIWLDDNGMFLGLHPRLAQRILFNTTMMENCSDLDVVFTTCPKDELRPLDKVLESKT
RAIDSCPLDYTILCRMYWGPAISYFHLNPGFHTGVAIGIDPDRQWDQLFKTMIRFGDVGL
DLDFSAFDASLSPFMIREAGRILTEMSGAPVHFGEALINTIIYSKHLLYNCCYHVCGSMP
SGSPCTALLNSIINNVNLYYVFSKIFKKSPVFFCDAVRILCYGDDVLIVFSRQVQIDNLD
SIGQRIVDEFKKLGMTATSADKSVPQLKPVSELTFLKRSFNLVEDRIRPAIAEKTIWSLV
AWQRN
Download sequence
Identical sequences Q6DUE9
Q6DUE9_9PICO

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