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Domain assignment for Q6PMZ5_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q6PMZ5_9PICO
Domain Number 1 Region: 1870-2332
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 6.92e-125
Family RNA-dependent RNA-polymerase 0.0000000000000233
Further Details:      
 
Domain Number 2 Region: 29-201
Classification Level Classification E-value
Superfamily Cysteine proteinases 1.08e-88
Family FMDV leader protease 0.000000016
Further Details:      
 
Domain Number 3 Region: 541-918
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 3.04e-80
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.000000117
Further Details:      
 
Domain Number 4 Region: 216-498
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 7.58e-76
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.000000000494
Further Details:      
 
Domain Number 5 Region: 1657-1853
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.87e-52
Family Viral cysteine protease of trypsin fold 0.0000000114
Further Details:      
 
Domain Number 6 Region: 1107-1342
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000016
Family Nitrogenase iron protein-like 0.071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Q6PMZ5_9PICO
Sequence length 2333
Comment AC=Q6PMZ5; DE=SubName: Full=Polyprotein; OS=Foot-and-mouth disease virus - type A. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Aphthovirus.
Sequence
MDTTDCFTALFHALREIKTLFLSRTQGKMEFTLHNGEKKTFYSRPNSHDNCWLNTILQLF
RYVDEPFFDWVYDSPENLTLEAIRQLEELTGLELHEGGPPALVIWNIKHLLHTGIGTASR
PSEVCMVDGTDMCLADFHAGIFLKGQEHAVFACVTSNGWYAIDDEDFYPWTPDPSDVLVF
VPYDQEPLNGEWKAKVQKRLKGAGQSSPATGSQNQSGNTGSIINNYYMQQYQNSMDTQLG
DNAISGGSNEGSTDTTSTHTTNTQNNDWFSKLASSAFSGLFGALLADKKTEETTLLEDRI
LTTRNGHTTSTTQSSVGVTYGYSTGEDHVSGPNTSGLETRVTQAERFFKKHLFNWTTDKP
FGYLEKLELPTDHKGVYGHLVDSFAYMRNGWDVEVSAVGNQFNGGCLLVAMVPEWKEFTP
REKYQLTLFPHQFISPRTNMTAHITVPYLGVNRYDQYKKHKPWTLVVMVVSPLTNSSIGA
TEIKVYANIAPTHVHVAGELPSKEGIVPVACSDGYGGLVTTDPKTADPVYGKVYNPPRTN
YPGRFTNLLDVAEACPTFLCFDDGKPYVVTREDGQRLLAKFDVSLAAKHMSNTYLSGIAQ
YYAQYSGTINLHFMFTGSTDSKARYMVAYVPPGVETPPDTPERAAHCIHAEWDTGLNSKF
TFSIPYVSAADYAYTASDVAETTNVQGWVCIYQITHGKAQNDTLVVSVSAGKDFELRLPV
DPRTQTTSAGESADPVTTTVENYGGETQVQRRHHTDVGFIMDRFVKINNTSPTHVIDLMQ
THQHGLVGALLRAATYYFSDLEIVVCHEGNLTWVPNGAPEAALSNAGNPTAYNKAPFTRL
ALPYTAPHRVLATVYNGTSKYSTTGGHTRGDLGALAARAAAQLPASFNFGAIRATDISEL
LVRMKRAELYCPRPLLAVEVTAQDRHKQKIITPVKQLLNFDLLKLAGDVESNPGPFFFSD
VRTNFSKLVETINQMQEDMSTKHGPDFNRLVSAFEELATGVKAIRTGLDEAKPWYKLIKL
LSRLSCMAAVAARSKDPVLVAIMLADTGLEILDSTFVVKKISDSLSSLFHVPAPVFSFGA
PILLAGLVKVASSFFRSTPEDLERAEKQLKARDINDIFAILKNGEWLVKLILAIRDWIKA
WIASEEKFVTMTDLVPGILEKQRDLNDPSKYKEAKEWLDNARQACLKSGNVHIANLCKVV
APAPSKSRPEPVVVCLRGRSGQGKSFLANVLAQAISTHFTGRTDSVWYCPPDPDHFDGYN
QQTVVVMDDLGQNPDGKDFKYFAQMVSTTGFIPPMASLEDKGKPFNSKVIIATTNLYSGF
TPRTMVCPDALNRRFHFDIDVSAKDGYKINNKLDIIKALEDTHTNPVAMFQYDCALLNGM
AVEMKRMQQDMFKPQPPLQNVYQLVQEVIERVALHEKVSSHPIFKQISIPSQKSVLYFLI
EKGQHEAAIEFFEGMVHDSIKEELRPLIQQTSFVKRAFKRLKENFEIVALCLTLLANIVI
MIRETRKRQQMVDDAVNEYIEKANITTDDKTLDEAEKNPLETSGASTVGFRERALPGHKA
SGDVNSEPAKPAEEQPQAEGPYAGPLERQKPLKVRAKLPQQEGPYAGPMERQKPLKVKAK
APVVKEGPYEGPVKKPVALKVKAKNLIVTESGAPPTDLQKMVMGNTKPVELILDGKTVAI
CCATGVFGTAYLVPRHLFAEKYDKIMLDGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVL
HRGNRVRDITKHFRDVAKMKKGTPVVGVINNADVGRLIFSGEALTYKDIVVCMDGDTMPG
LFAYRAATKAGYCGGAVLAKDGAETFIVGTHSAGGNGVGYCSCVSRSMLLKMKAHIDPEP
HHEGLIVDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLSEGVVLDEVIF
SKHKGDTKMSEEDKALFRRCAADYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAP
GLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKKEYKFACQTFLKDEIRPMEKVRAGK
TRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVW
DVDYSAFDANHCSDAMNIMFEEVFSTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMP
SGCSATSIINTILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHF
KSLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYKPVMASKTLEAILSFARR
GTIQEKLISVAGLAVHSGPDEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDA
Download sequence
Identical sequences Q6PMZ5
Q6PMZ5_9PICO

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