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Domain assignment for Q6W0A7_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q6W0A7_9PICO
Domain Number 1 Region: 1859-2321
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.27e-121
Family RNA-dependent RNA-polymerase 0.0000000000000292
Further Details:      
 
Domain Number 2 Region: 29-200
Classification Level Classification E-value
Superfamily Cysteine proteinases 2.78e-85
Family FMDV leader protease 0.0000000323
Further Details:      
 
Domain Number 3 Region: 541-918
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 4.87e-80
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0000000139
Further Details:      
 
Domain Number 4 Region: 216-498
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 8.01e-80
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.000000000122
Further Details:      
 
Domain Number 5 Region: 1646-1842
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 3.43e-52
Family Viral cysteine protease of trypsin fold 0.0000000114
Further Details:      
 
Domain Number 6 Region: 1106-1341
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000432
Family Nitrogenase iron protein-like 0.066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Q6W0A7_9PICO
Sequence length 2322
Comment AC=Q6W0A7; DE=SubName: Full=Polyprotein; OS=Foot-and-mouth disease virus HKN/2002. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Aphthovirus.
Sequence
MNTTDCFIALLHILREIKALFLSRTQGKMEFTLYNGEKKVFYSRPNNHDNCWLNAILQLF
RYVDEPFLEWVYNSPEDLTLEAINNLEEVTGLELREGGPPALVVWNTKHLLYTGIGTASR
PSEVCMIDGTDMCLADFHAGIFLKGQDHAVFACVTSDGWYAIDDEDFYPWTPDPADVLVF
VPYDQEPLNAEWKAKVQKRLRGAGQSSPTTGSQNQSGNTGSIINNYYMQQYQNSMDTQLG
DNAISGGSNEGSTDTTSTHTNNTQNNDWFSKLANTAFSGLFGALLADKKTEETTLLEDRI
LTTRNGHTTSTTQSSVGVTYGYATAEDFVSGPNTSGLETRVVQAERFFKTHLFDWGTNDS
FGRCYLLELPTDHKGVYGSLTDSYAYMRNGWDVEVTAVGNQFNGGCLVVAMVPELCPITK
RELYQLTLFPHQFINPRTNMTAHITVPYLGVNRYDQYKVHKPWTLVVMVVAPLTVNNEGA
PQIKVYANIAPTNVHVAGELPSKEGIFPVACSDGYGGLVTTDPKTADPVYGKVFNPPRNL
LPGRFTNLLDVAEACPTFLHFDGDVPYVITKTDSDRVLAQFDLSLAAKHMSNTFLAGLAQ
YYAQYSGTINLHFMFTGPTDAKARYMVAYAPPGMEPPKTPEAAAHCIHAEWDTGLNSKFT
FSIPYLSAADYAYTASDVAETTNVQGWVCLFQITHGKADGDALVVLASAGKDFDLRLPVD
ARTQTTSAGESADPVTTTVENYGGETQVQRRQHTDVAFILDRFVKVKPQEQVNVLDLMQI
PAHTLVGALLRTATYYFSDLELAVKHEGDLTWVPNGAPEAALNNTTNPTAYHKEPLTRLA
LPYTAPHRVLATVYNGSSKYGDTSTNNVRGDLQVLAQKAERALPTSFNYGAIKATRVTEL
LYRMKRAETYCPRPLLAIQPSTARHKQKIVAPAKQLLNFDLLKLAGDVESNPGPFFFSDV
RANFTKLVDTVNQMQEDMSTKHGPDFNRLVSAFEELAAGVKAIRTGLDEAKPWYKLIKLL
SRLSCMAAVAARSKDPVLVAIMLADTGLEILDSTFVVKKISDSLSSLFHVPAPAFSFGAP
ILLAGLVKVASSFFQSTPEDLERAEKQLKARDINDIFAVLKNGEWLVKLILAIRDWIKAW
IASEEKFVTMTDLVPGILEKQRDLNDPGKYKEAKEWLDNARQACLKSGNVHIANLCKVVA
PAPSKSRPEPVVVCLRGKSGQGKSFLANVLAQAISTHFTGRTDSVWYCPPDPDHFDGYNQ
QTVVVMDDLGQNPDGKDFKYFAQMVSTTGFIPPMASLEDKGKPFNSKVIIATTNLYSGFT
PRTMVCPDALNRRFHFDIDVSAKDGYKVNNKLDIVKALEDTHTNPVAMFQYDCALLNGMA
VEMKRMQQDMFKPQPPVQNVYQLVQEVIERVELHEKVSSHPIFKQISIPSQKSVLYFLIE
KGQHEAAIEFFEGMVHDSIKEELRPLIQQTSFVKRAFKRLKENFEIVALCLTLLANIVIM
LRQARKRRQSVDDSPDSDITLGGAEKNPLETSGASAVGFRERPPTEQETCEDANAEPVVF
GREQPRAEGPYAGPLERQKPLKVKARLPQQEGPYAGPMERQKPLKVKAKVPVVKEGPYEG
PVKKPVALKVKAKNLIVTESGAPPTDLQKMVMGNTKPVELILDGKTVAICCATGVFGTAY
LVPRHLFAEKYDKIMLDGRALTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNRVRDITK
HFRDVARMKKGTPVVGVINNADVGRLIFSGEALTYKDIVVCMDGDTMPGLFAYRASTKAG
YCGGAVLAKDGAETFIVGTHSAGGNGIGYCSCVSRSMLMKMKAHIDPEPHHEGLIVDTRD
VEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNEGVVLDDVIFSKHKGDTRMSE
EDKALFRRCAADYASRLHSVLGTANAPLSVYEAIKGVDGLDAMEPDTAPGLPGALQGKRR
GALIDFENGTVGPEVEAALKLMESREYKFVCQTFLKDEIRPLEKVRAGKTHIVDVLPVEH
ILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYKNVWDVDYSAFDANH
CSDAMNIIFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINT
ILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPAD
KSDKGFVLGHSITDVTFLKRHFHMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVA
GLAVHSGPDEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDA
Download sequence
Identical sequences Q6W0A7
Q6W0A7_9PICO

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