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Domain assignment for Q71FG9_9PICO from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q71FG9_9PICO
Domain Number 1 Region: 1738-2220
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 8.9e-112
Family RNA-dependent RNA-polymerase 0.00000524
Further Details:      
 
Domain Number 2 Region: 2-247
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 3.69e-49
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0065
Further Details:      
 
Domain Number 3 Region: 249-489
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 2.25e-48
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0026
Further Details:      
 
Domain Number 4 Region: 1523-1733
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 5.01e-42
Family Viral cysteine protease of trypsin fold 0.00000000321
Further Details:      
 
Domain Number 5 Region: 507-777
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 2.91e-35
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0021
Further Details:      
 
Domain Number 6 Region: 1218-1371
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000593
Family Extended AAA-ATPase domain 0.085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Q71FG9_9PICO
Sequence length 2227
Comment AC=Q71FG9; DE=SubName: Full=Polyprotein; OS=Hepatitis A virus. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC=Picornaviridae; Hepatovirus.
Sequence
MNMAKQGIFQTVGSGLDHILSLADIEEEQMIQSVDRTAVTGASYFTSVDQSSVHTAEVGS
HQIEPLKTSVDKPGSKKTQGEKFFLIHSADWLTTHALFHEVAKLDVVKLLYNEQFAVQGL
LRYHTYARFGIEIQVQINPTPFQQGGLICAMVPGDQSYGSIASLTVYPHGLLNCNINNVV
RIKVPFIYTRGAYHFKDPQYPVWELTIRVWSELNIGTGTSAYTSLNVLARFTDLELHGLT
PLSTQMMRNEFRVSTTENVVNLSNYEDARAKMSFALDQEDWKSDPSQGGGIRITHFTTWT
SIPTLAAQFPFNASDSVGQQIKVIPVDPYFFQMTNTNPDQKCITALASICQMFCFWRGDL
VFDFQVFPTKYHSGRLLFCFVPGNELIDVTGITLKQATTAPCAVMDITGVQSTLRFRVPW
ISDTPYRVNRYTKSAHQKGEYTAIGKLIVYCYNRLTSPSNVASHVRVNVYLSAINLECFA
PLYHAMDVTTQVGDDSGGFSTTVSTEQNVPDPQVGITTMRDLKGKANRGKMDVSGVQAPV
GAITTIEDPVLAKKVPETFPELKPGESRHTSDHMSIYKFMGRSHFLCTFTFNSNNKEYTF
PITLSSTSNPPHGLPSTLRWFFNLFQLYRGPLDLTIIITGATDVDGMAWFTPVGLAVDTP
WVEKESALSIDYKTALGAVRFNTRRTGNIQIRLPWYSYLYAVSGALDGLGDKTDSTFGLV
SIQIANYNHSDEYLSFSCYLSVTEQSEFYFPRAPLNSNAMLSTESMMSRIAAGDLESSVD
DPRSEEDRRFESHIECRKPYKELRLEVGKQRLKYAQEELSNEVLPPPRKMKGLFSQAKIS
LFYTEEHEIMKFSWRGVTADTRALRRFGFSMAAGRSVWTLEMDAGVLTGRLVRLNDEKWT
EMKDDKIVSLVEKFTSNKYWSKVNFPHGMLDLEEIAANSKDFPNMSETDLCFLLHWLNPK
KINLANRMLGLSGVQEIKEQGVGLIAECRTFLDSIAGTLKSMMFGFHHSVTVEIINTVLC
FVKSGILLYVIQQLNQDEHSHIIGLLRVMNYADIGCSVISCGKVFSKMLETVFNWQMDSR
MMELRTQSFSNWLRDICSGITIFKSLKDAIYWLYTKLKDFYEVNYGKKKDVLNILKDNQQ
KIEKAIEEADNFCILQIQDVERFDQYQKGVDLIQKLRTVHSMAQVDPNLGVHLSPLRDCI
ARVHQKLKNLGSINQAMVTRCEPVVCYLYGKRGGGKSLTLIALATKICKHYGVEPEKNIY
TKPVASDYWDGYSGQLVCIIDDIGQNTTDEDWSDFCQLVSGCPMRLNMASLEEKGRHFSS
PFIIATSNWSNPSPKTVYVKEAIDRRLHFKVEVKPASFFKNPHNDMLNVNLAKTNDAIKD
MSCVDLVMDGHNISLMDLLSSLVMTVEIRKQNMSEFMELWSQGISDDDNDSAVAEFFQSF
PSGEPSNSKLSSFFQSVTNHKWVAVGAAVGILGVLVGGWFVYKHFSRKEEEPIPAEGVYH
GVTKPKQVIKLDADPVESQSTLEIAGLVRKNLVQFGVGEKNGCVRWVMNALGVKDDWLLV
PSHAYKFEKDYEMMEFYFNRGGTYYSISAGNGGIQSLDVGFQDVVLMKVPTIPKFRDITQ
HFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYVHKKNDGTTVDLTVDQAW
RGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGGNSILVAKLVTQEMFQNIDKKIESQRI
MKVEFTQCSMNVVSKTLFKKSPIHHHIDKTMINFPAAMPFSKAEIDPMAVMLSKYSLPIV
EEPEDYKEASVFYQNKIVGKTQLVDDFLDLDMAITGAPGIDAINMDSSSGFPYVQEKLTK
RDLIWLDENGLLLGVHPRLAQRILFNTVMMENCSDLDVVFTTCPKDELRPLEKVLESKTR
AIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAIGIDPDRQWDELFKTMIRFGDVGLD
LDFSAFDASLSPFMIREAGRIMSELSGTPSHFGTALINTIIYSKHLLYNCCYHVCGSMPS
GSPCTALLNSIINNINLYYVFSKIFGKSPVFFCQALRILCYGEDVLIVFSRDVQIDNLDL
IGQKIVDEFKKLGMTATSADKNVPQLKPVSELTFLKRSFNLVEDRIRPAISEKTIWSLIT
WQRSNAEFEQNLENAQWFAFMHGYEFYQKFYYFGQSCLEKEMIEYRLKSYDWWRMRFYDQ
CFICDLS
Download sequence
Identical sequences Q71FG9
Q71FG9_9PICO

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