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Domain assignment for Q8QY02_9CALI from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q8QY02_9CALI
Domain Number 1 Region: 25-540
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 2.58e-146
Family Caliciviridae-like VP 0.00000000413
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Q8QY02_9CALI
Sequence length 547
Comment AC=Q8QY02; DE=SubName: Full=VP1 capsid protein; Flags: Fragment; OS=Norwalk-like virus Sw/NLV/VA34/1998/NL. OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Caliciviridae; OC=Norovirus.
Sequence
MKMASNDASPSADGSAGLVPEVNNETMALEPVVGAPLAAPVAGQHNIIDPWIKMNFVQAP
NGEFTVSPRNAPGEILLDLELGPDLNPYLSHLARMYNGYAGGMEVQVVLAGNAFTAGKII
FAAVPPNFPAENLSAAQVTMCPHVIVDVRQLEPVMLPMPDIRNKLFHYNQVDDPKLRLLA
YLYTPLRANNAGDDVFTVSCRVLTRPTPDFEFMFLVPPTVESKTKPFSLPSLTLDELSNS
RFPAPIVQLYTNPHDNLVVQPQNGRCTIDGLLQGTTQLVSCNVCSFRGTLGDGQPASHSE
EEIMPMAFNIQREIMLENLDGSPYDPTDDIPAVLGSPDFQGVVFGILSQRNTDGQTRAHE
AKVDTRLARFAPKLGFVVATVENTDFHANQPCRFTPVGLGGDNNRDFNQWGLPAYGGALT
NNTNLAPPVMPVYPGEQLLFFRSQLPSSGGVVGGWLDCLLPQEWVQHFFQESATSQSDVA
LVRYINPTTGRVLFEAKLHKQGFLTVAASGSYPLVVPADGYFRFESWVNQFYTLAPMGNG
SGRRRVR
Download sequence
Identical sequences Q8QY02
Q8QY02_9CALI

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