SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Q9WR38_IBDV from UniProt viral sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Q9WR38_IBDV
Domain Number 1 Region: 12-431
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 6e-197
Family Birnaviridae-like VP 0.000000000000301
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Q9WR38_IBDV
Sequence length 1012
Comment AC=Q9WR38; DE=SubName: Full=Structural polyprotein; OS=Avian infectious bursal disease virus (IBDV) (Gumboro disease virus). OC=Viruses; dsRNA viruses; Birnaviridae; Avibirnavirus.
Sequence
MTNLTDQTQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFF
PGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLVSRSLTVRSSTLPGGVYAL
NGTINAVTFQGSLSDLTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLPTSYDLGYVRL
GDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQSGGVTITLFSANIDAITSL
SIGGELVFHTSVHGLALDATIYLIGFDGTTVITRAVASDNGLTTGIDNLMPFNLVIPTNE
ITQPITSIKLEIVTSKSGGQAGDQMSWSAMWSLAVTIHGGNYPGALRPVTLVAYERVATG
SVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERERLGIKTVWPTREYT
DFREYFMEVADLNSPLKIAGAFGFKDIIRAIRRIAVPVVSTLFPPAAPLALAIGEGVNYL
LGDEAQAASGTARAASGKARAASGRIRQLTLAADKGYEVVANLFQVPQNPVVDGILASPG
VLRGAHNLDCVLREGATLFPVVITTVEDAMTPKALNSKMFAVIEGVREDLQPPSQRGSFI
RTLSGHRVYGYAPDGVLPLETGRDYTVVPIDDVWDDSIMLSKDPIPPIVGNSGNLAIAYM
DVFRPKVPIHVAMTGALNACGEIEKVSFRSTKLATAHRLGLKLAGPGAFDVNTGPNWATF
IKRFPHNPRDWDRLPYLNLPYLPPNAGRQYHLAMAASEFKETPELESAVRAMEAAASVDP
LFQSAISVFMWLEENGIVTDMANFALSDPNAHRMRNFLANAPQAGSKSQRAKYGTAGYGV
EARSPTPEEAQREKDTRISKKMETMGIYFATPEWVALNGHRGPSPGQLKYWQNTREIPDP
NEDYLDYVHAEKSRLASEEQIQRAATSIYGAPGQAEPPQAFIDEVAKVYEINHGRGPNQE
QMKDLLLTAMEMKHRNPRRAPPKPKPKPNAPTPRPPGRLGRWIRTVSDEDLE
Download sequence
Identical sequences Q9WR38
Q9WR38_IBDV

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]