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Domain assignment for Q9YND4_RHDV from UniProt viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q9YND4_RHDV
Domain Number 1 Region: 63-365
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 4.82e-63
Family Caliciviridae-like VP 0.0008
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Q9YND4_RHDV
Sequence length 579
Comment AC=Q9YND4; DE=SubName: Full=Capsid structural protein VP60; GN=Name=VP60; OS=Rabbit hemorrhagic disease virus (RHDV). OC=Viruses; ssRNA positive-strand viruses, no DNA stage; Caliciviridae; OC=Lagovirus.
Sequence
MEGKARTAPQGEAAGTATTASVPGTTTDGMDPGVVATTSVVTAENSSASIATAGIGGPPQ
QVDQQETWRTNFYYNDVFTWSVADRPGSILYTVQHSPQNNPFTAVLSQMYAGWAGGMQFR
FIVAGSGVFGGRLVAAVIPPGIEIGPGLEVRQFPHVVIDARSLEPVTITMPDLRPNMYHP
TGDPGLVPTLVLSVYNNLINPFGGTTSAIQVTVETRPSEDFEFVMIRAPSSKAVDSISPA
GLLTTPVLTGVGNDNRWNGQIVGLQPVPGGFSTCNRHWNLNGSTYGWSSPRFGDIDHRRG
SASYPGNNSTNVLQFWYANAGSAIDNPISQVAPDGFPDMSFVPFNGPNIPTAGWVGFGGI
WNSNNGAPAATTVQAYELGFATGAPNNLQPTTNTSGAQTVAKSIYAVVTGTNQNPTGLFV
MASGVISTPNASAVTYTPQPDRIVTTPGTPAAAPVGKNTPIMFASVVRRTGDVNATAGSA
NGTQYGTGSQPLPVTIGLSLNNYSSALLPGQFFVWQLTFASGFMEIGLSVDGYFYAGTGA
STTLIDLTELIDVRPVGPRPSKSTLVFNLGGVANGFSYV
Download sequence
Identical sequences Q9YND4
Q9YND4_RHDV

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