SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|75909342|ref|YP_323638.1| from Anabaena variabilis ATCC 29413

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|75909342|ref|YP_323638.1|
Domain Number 1 Region: 2-332
Classification Level Classification E-value
Superfamily Pectin lyase-like 8.17e-43
Family Pectate transeliminase 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|75909342|ref|YP_323638.1|
Sequence length 624
Comment hypothetical protein Ava_3135 [Anabaena variabilis ATCC 29413]
Sequence
MAQTFYVNPATGNDANPGSQTAPLKTITQALKVASPDTTIQLANGSYNAASGEVFPLTIP
SSVKVVGNETSKGSNILIEGSGNYLSRTFAGQNVTFVLLNNAELRGVTVTNPASRGSGAW
IESTTPTVANSTFINCKREGVFATGDANPVIIGNVFTENAANGIAIAKNSKGQIQGNICF
KTGFGIAVSDTASPTLIDNKIYENRSGIVVSGTSRPILRNNLVENNTDDGLTVIGNAIPD
IGNTSNPGGNILRNNAKFDLQNASSNKLISTGNQIDTTKVSGNVEFIVSQVPTPTPTPTP
TPTPTPTPTPTPTPTPTPTPIPTPTPIPTPTPIPTPTPIPTPTPTPIPTPTPTPIPTPTP
IPTPTPTPTPTPTPTPTPTPTPIPTPTPTPTPTPIPTPTPTPTPTPTPTPTPTPTPTPTP
TPIPTPTPKPINLKDIGNHWAAPFIRELVQQGIVSGFPDGTFKPDATMTRAQYAALLVKA
FNPSPNRAVIRFKDVADNFWAFKVIQQAYQGLFLAGFPDNTFRPNDNIQRVQVVVSLVNG
LGLGLSNNVANTIRAFDDQAKIPDYAKDEVAKAIEKGIIVNYPNIKQLNPTRDATRAEVV
AIVYQALVDADRVAAINSPYIVNG
Download sequence
Identical sequences A0A1W5CJU7 Q3M8E3
gi|75909342|ref|YP_323638.1| 240292.Ava_3135

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]