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Domain assignment for gi|307347004|ref|YP_003896046.1| from NCBI viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|307347004|ref|YP_003896046.1|
Domain Number 1 Region: 361-658
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 0.00000000000779
Family RNA-dependent RNA-polymerase 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|307347004|ref|YP_003896046.1|
Sequence length 1079
Comment VP1 [Rotavirus D chicken/05V0049/DEU/2005]
Sequence
MGTYNLLLQKYLRWLYGKDATVIPIFITNDQNNQEILNSIVDYAKQLAIDDKYDYKLIED
KLSKCNFDYEIVSFFTYSDQKYDNVEQKLLKYVNKKKVLVADLTRNKLKYENNYITKDLY
TEDDYTDTLMDPSINTSLRSNLNAAMFVIENIEDKKIQSRYRHLFEYVASTVSHYGIPVH
NQKYRYDYKEMYNKPYYLVPWANSSIEMIFAVSSHELYLVAEELIINSFSNRSTLAKLTS
SPMTTLTSKLDLYSCYMTTEDLELEYSDKIVKSYITDEAQLELDEQIAELRKEKMTKTAD
IIDEWQRNPSIDTFPLMAQIYSFSFHVGYRKQMMLDAVTDQLSIEYSDTFDKDMYNMYTN
NIIKIIDDMLRDHIKKEDKMLLNAEIAGLLSMSSASNGESRVIKFGRRTVRSTKKNMHVM
DDIFNKQYDLDVPDVNENNPIPLGRRDVPGRRTRVIFILPYPYFIAQHSVVELYLRESKH
IKEFSEFYSQSSQLLSYGDTNRYLNQSTIIVYADVSQWDSSKHNTTPLRNAILKAIEQLK
SYTTNEKVITALNNYALTQMKLKNSFVTIGNKVLQYGAVASGEKQTKLMNSIANLALITT
VINYLNVGESYRIKIIRVDGDDNYFIMEFDRKVDKQLVTVVSNAVKDTYGRMDVKVKALT
ATTGLEMAKRYIAGGRLFFRAGVNILNNEKRTHTTTYDQAAIIYANYLVNKMRGYNMERI
FILCKIMQMTSVKITGSIRLFPASLMLTTNSPYKVFDDVDFVQTYNSSTIAIHLQKMLIS
VSQVKSNLADDIAKSEKFTNYVQFLTKKLLVHNNKIVEMGIARTEKAKLNSYPPIANEKR
NNQLKTLMTFLQTPTYKMSTDVTINDMMKIINEYTNYTIITDKYGIQPNPMPLLPENIQF
AMSHVGARVYQIEESAARSAISKLISNYTVYKPSVDELYKVINSNERILFEYVTSFGVPT
RDVTAYLSAKLYKKDRNLILESYIYQIMSVNYNAYQLFNLNSELFDKYINIVTYMKIPSV
NFIIFTYLKLVILNKMLQERKLYKAYCQIPKHLLHILWKMSINLATISSPYTIANFFQE
Download sequence
Identical sequences E2EBT9
YP_003896046.1.62882 gi|307347004|ref|YP_003896046.1|

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