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Domain assignment for gi|365824264|ref|YP_004935382.1| from NCBI viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|365824264|ref|YP_004935382.1|
Domain Number 1 Region: 298-605
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 1.65e-37
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.00022
Further Details:      
 
Domain Number 2 Region: 75-267
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 1.94e-25
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0039
Further Details:      
 
Domain Number 3 Region: 673-753,781-861
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 0.00000000000212
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.06
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|365824264|ref|YP_004935382.1|
Sequence length 1009
Comment unnamed protein product [Halastavi arva RNA virus]
Sequence
MKTATITSTTSSTKYSSTTPTKQAIAADAASSSSSAGETIFEPNSAHREQQGLTTFIDSL
PSEMEASSPLTTQADTSALTVDHTISSDIKSFMARPTFVTNFLWTSVSGAGDVLTYYHLP
TDLLNLSAIKLEKVSRYQFMSFDIIVRLFGSPIQFQSGRLIMAFETGRNERQARAAPYNI
ITQTQLPHVVYDPAIPSPVELRIPFCAPISQWDTIGQYGLGTLAVSVLSPLTSASTSIRV
VMSVQARFENVRLGVPTQTASQTTPLRRSLVTDAKYRIAYAEGREEVSEANSKHYLSEGL
DSVSTVATALSSFPLLAPIAQPVSWASSIASRAARAFGFSSPPDLTGPTRLISHQQPNYA
HFDSPSTAVPLTFSQGFDIPVAPVFGEDHDEMDINYIASKLSIALSFIWPDTAAVGSVLS
YWPVMPGLSVNAAGAQNVSWGQYIPTPMAYVASMFKYWAGSINKMDCVATPFHAGRLVLA
YVPDFDPLGTFSVTEIGNNFNIVWDITDSSHIEFEVPYMGNTPYLNTMLDNAAMEYLINS
ETSGVQPRERIRKCANGAIVIFVLNKLVAPSTAASSVNMLLWTGAGKDITFAEPTLGNYR
PANAAAARIDYTGKYFDGTTHYQPEMGVVPTRRIESLDEVDEALEMVEWPSASSSPRRVM
AESMQDPYNKNSTQNLTDFTAWMPPHYINPTERAKLCTGEVITNLRQLTKRMAPSYYMFP
HNVTTAGAMTSDYPSSNHVLELDLDYFGTHDGAQDTVIYKRNIAPTGTSRGTTPNLTELD
TYLSYIGAMYAYARGSRRFHLTTHPSNIINASSFTGKLLSDLTDPTVRGDTGYWDFRVSQ
ELELDTPPRQPYFRPDVNVYGYNYANDAFATLPLRNYDFGLSGMMLSDAGVRKIGESGTH
LEVSVPSSTNFPIRLITTPSLSESDTIKAIAHNNPRARRFLELRYRPFSTAQYGTTATFT
PIPWPNPLVISEAAGDDFSFGRFQFAPNLVRIKQPLIFSNSTTGGKLRR
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Identical sequences G9F6F9
gi|365824264|ref|YP_004935382.1| YP_004935382.1.14893

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