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Domain assignment for gi|607064626|ref|YP_009022064.1| from NCBI viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|607064626|ref|YP_009022064.1|
Domain Number 1 Region: 1663-1982
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.43e-53
Family RNA-dependent RNA-polymerase 0.031
Further Details:      
 
Domain Number 2 Region: 704-838
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 4.94e-24
Family AlkB-like 0.015
Further Details:      
 
Domain Number 3 Region: 1180-1346
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000015
Family Nitrogenase iron protein-like 0.073
Further Details:      
 
Weak hits

Sequence:  gi|607064626|ref|YP_009022064.1|
Domain Number - Region: 898-983
Classification Level Classification E-value
Superfamily Cysteine proteinases 0.0608
Family Ubiquitin thiolesterase protein OTUB2 (Otubain-2) 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|607064626|ref|YP_009022064.1|
Sequence length 1990
Comment replicase [Gaillardia latent virus]
Sequence
MALTYRSPLEENVAAYDSNVQSLIASTSAHYYKEEEESNFKFFNYHLTPVAKQKLITSGI
YLSPFSAMPHSHPVCKTLENYFLYIVAAPLLDSRFYFVGIKNHKINLLKTRNSDLSMVSK
INRYVTSADKVRYGSDFVTKPIYTGECLARHRSCLEGATLKDLVPALKEGKAKHVFLHDE
LHYWSPRDLITFLELVKPEIMYATLVYPAEILAGAAFSLHPWCYTFQIIGGKLIFYPDGV
QTESYEQPLSCGYLLEAKRIITRHSIYMVDLVQSKFAHHLIAITRTEALSPNYRSFGPFD
ATSSSALSPLMRTENNFIPVSFEIVSRVYRYLRTLKKPDVQSAMAKLSQLLQEPRGVEIK
FIEDFSSLVINTGTVRSIIKPELVKLFLGRWLGRLPHALAVKFSGVSEVSLDDFVSQMEP
YTFQIKLADVDWNYHHRWDLYSKAEEDYGVDASKLLEESFVANRLYEFGDRARAPYYSVK
GQKNWHHILELRSDFDEMYFISTCLRELFNPTLSGISFYEVLGVLTGKLQASKSILISTK
SSIRQMQEPGRYNVYMRAVSRYAPKHEREWASSGAKWFFVSDRHNQQYLCDQPDGIAVPK
AFKKVFGTVVGDILAGVKLRKRRVVGFRLAEQPTPETTSGEGEGGMRHDPKPQNDAEPIR
EEEAVPVVVQPEQLCPAYCACGIELERSELIATDLHAFRAPDNLGNRSGGWYSATGVGYK
YNGGKHGSLGWPKWLGVWMQLNGIDSDYYNCCLYQVYKEGARIGFHSDDEAIFEEGASIL
TCNITGSADFSFKCTVGGNSQFLDGPMSILMPEGFQESHKHSVSRCSKGRASVTFRRLAG
EMIGEQPIEELRKVCVAEQREQGPESSELPERSGSEQPGEFTQRNCIGVVNHRHGIPNMN
YNLIDVPGDGNCFWHCLSKAVSMGVKELKQACTRIDFKDEELNTRFEHQMQPRVFAEEEA
IMAAAAILRAKIIVIAPEGPQVSEFTPHGELLQVHYLEMKANHFQLIELKNSCVIRAIAS
AMNRECHEVLKVLEESGDLEEGSLLLSGLGVELAELEHFFSLFGIAALVEAGGTEHRLNE
TGPVPAYFKLENAHIEHIRKNCSVKSELLRGENLGLNITNRSLLYAEQCGSYLKYKPNES
RAKVLADCFLAGRTGILNSKLFNNSGNLFDEINHNGEHEESVLGVFGTFGCGKSTAFRQF
FHLNPGKGVFYVSPRKALAEEFRSKTLSRQVGRLDKIKEKNWLLCTFEVFLKKHHLVKPG
MAVIIDELQLYPPGYLDLTMLLCPKGVLFLVGGDPCQSDYDNEMDRPWLGSMESDCERLL
KGQKYKYNGLSRRFVNKNFSSRLHCQFTEDRLTEEEPHLLYTGLDEMVQIEDEYKEVFLV
SSFEEKKIVSAHFDVKSEAILTFGESTGLNFKRGVIIITNVSALTSEKRWVTALSRFSTN
VCLVNLVGVDWSTLAKVYVERTLANFLCAQSHQGKLLELLPGEPHITAGFPDKIGKDEGL
REEKMQGDPWLEGMIDLFQIEDVEEVEEQFEELQXEWFKTHLPREELESVRARWVHKLLA
KEFREVRMGYLTSEQFTDEYPKDAGVNLTNQAERFETIYPRHRANDSVTFLMAVKKRLRF
SRPAKEKCKLIEASSYGRFMLNEFLDKVPLKRKHDPIMMAQAKKEFEDKKTSKSAATIEN
HSGRSCRDWLIDIGLVFSKSQLCTKFDSRFRVAKAAQSIVCFQHEVLCRFAPYMRYIEKK
LHEVLPERYYIHSGKGLDELNDWVKKGRFSGICTESDYEAFDASQDQYMVAFEVEVMRYL
GLPNDLIEDYKFIKTHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLKYEIKGHEFIC
FAGDDMCASERLALKKQHESFLGKLKLKAKVFMVDKPTFCGWNLCPDGIYKKPQLVMERM
CIAKEKANLANCIDNYAIEVSFAYKLGERALNRMDEEEAAAFYNCVRIIIKNKHLLKSDI
RTLYEENKLT
Download sequence
Identical sequences X2KTS4
gi|607064626|ref|YP_009022064.1| YP_009022064.1.31020

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