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Domain assignment for gi|61806172|ref|YP_214532.1| from NCBI viral sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|61806172|ref|YP_214532.1|
Domain Number 1 Region: 555-687
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 0.00000000000341
Family Tetraviridae-like VP 0.025
Further Details:      
 
Domain Number 2 Region: 120-165
Classification Level Classification E-value
Superfamily Carbohydrate binding domain 0.00000301
Family Carbohydrate binding domain 0.0058
Further Details:      
 
Weak hits

Sequence:  gi|61806172|ref|YP_214532.1|
Domain Number - Region: 320-402
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00022
Family Pectin methylesterase 0.033
Further Details:      
 
Domain Number - Region: 171-216
Classification Level Classification E-value
Superfamily Carbohydrate binding domain 0.000235
Family Carbohydrate binding domain 0.0072
Further Details:      
 
Domain Number - Region: 17-45
Classification Level Classification E-value
Superfamily Carbohydrate binding domain 0.0112
Family Carbohydrate binding domain 0.0036
Further Details:      
 
Domain Number - Region: 73-105
Classification Level Classification E-value
Superfamily Carbohydrate binding domain 0.0981
Family Carbohydrate binding domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|61806172|ref|YP_214532.1|
Sequence length 1326
Comment phage tail fiber-like protein [Prochlorococcus phage P-SSM2]
Sequence
MAEFRLGRLKFNWRSDWTISTAYVIDDIIKYGANTYVCKKNHTSAGAEESFYSTDLTLNW
SLHTEGIVNKGSWAANYWYKVNDIFKYGNTQYRVTTGFTSGATFDEAATTTNVVEYLQSF
NYEDTWSNSTQYQDGDVVTYGGYTYVAKSVNTNKAPSYNLTNDWDIITTGFSVVGYYSTT
TDYKQGDVVQYGGYTYVAITTSTNTIPTTPANWTLVTKGVSWKGNWDSTVKYELGDAVKR
LSNSYIGVATVGSLNEDPSTDGTSTYWSMLAEGAANNVMTTQGDMVYYTTGSARLPKGTN
GQVLAMSSGGVPNWESNSVTHPVFYVTEEGSDTNDGSNISRAFASVRHACAKAAETGNPC
SVYVKAGTYSETLPIVVPPFVSIVGDNLRTSRVKPGVHYAHTFISGLTGSITADSGGPFT
AGSGTTYDSATGDLVLEIGTHSLTTSNTIGINGNSLTFTCSQDSHATQHTYPRPKDPVYN
KTDIAIIATTGTTITVRVGKGNASRHQDLVLASAPSSVSYGSSIFNGAGTKCAVILDSDY
AEKKIQIRWLSGGEWTTSDEWENGGTDIGITSVTTRPNEESTMFMLSNATMLKDLLMEDM
TGFSPAGIVTTISCSIAGSKVTGSELFPDLVGTTVTGSGVSTGTKVSGFIDAQTLEVDIV
QNLGATDLTFTAQQYDPNNAHIKGTFCALNPESRVIKSPYVSNCSAKSVRGIGAVVDGGV
HRQFVDGSATPSNKSIVFDSFTNIHDEGMAFWITDGAVAETVSCFTYYNHISYAATRGGR
LRSLVGNSSWGKYGVVSSGFSPLEKAREGEIEGLVLQYDVDSMSGSGFQVGERIRGNTSG
AWGYINSVQGTTQEKIYYSVISEGPVGVGTGFGPGETITAMTSGTTAPLLNNTSANEGQA
GRILVLSGLGTSPTLEVNGSIEFITGLGNGGYNSDNITGADPFTFVISGVSQTGPTGKGN
VQIDRAQWSTTGAAHTGGSTTFVKYPVNIGASFTLLTPAAAGDTTLSTSTISGFNPGEYC
LSPTNELCKIVSFPTANSMSVQRAQDGAGAAVAYSIGDIFTSIGTTSFVTSAEVNKDFTG
VSTDFRATISNRFEDAVGAYMKIDDEFTKVTGVTTDTYGTTTVTLVEEKAAKSFDEQDIK
IRYIFSQARLTGHDFLQVGTGGTYTTNWPDVPSQDPVQTQEITEDFPGRVFYVSTDEQGN
FRVGKYFRVNQATGAATLNANSFDLSGLTSIRLGSIGAQLGAQVNEFSTDGTMAQNSNEK
VPTQAAVRTYVATRDAEHLVMAQNAANLGIATALAHANAGIATLRTDANTEFRSGVQVSE
FFVGQI
Download sequence
Identical sequences Q58M54 R9S8U9
YP_214532.1.62628 Q58M54_BPPRM gi|61806172|ref|YP_214532.1|

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