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Domain assignment for ENSPCAP00000000593 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000000593
Domain Number 1 Region: 44-136
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.01e-37
Family SCAN domain 0.0000517
Further Details:      
 
Domain Number 2 Region: 245-284
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000025
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 3 Region: 301-343
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000515
Family Classic zinc finger, C2H2 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000000593   Gene: ENSPCAG00000000616   Transcript: ENSPCAT00000000629
Sequence length 370
Comment pep:novel genescaffold:proCap1:GeneScaffold_3441:19958:29408:1 gene:ENSPCAG00000000616 transcript:ENSPCAT00000000629 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNTDLNEVLLLHIQAPEVGEGLLKEKMEAESLQRQESRLKHSNPLAVEIFRRRFRQLCYQ
ETPGPREALIRLRELCCQWLRPHVSTKEQILELLVLEQFLTILPEELQGWMREHCPESGE
EAVTLLEDLERELDQPQQEMVAHRHRQEDLFKERVSMEKHTSLSLQSQPKEPQFTWKSTH
EPHTFGKTTKPETGKLAPKPEHTKMESHRMILNQQRQEHFQSSLFWILCECKDKFEMHQG
SSEEETEHRCDPSGKSFMYSISPTAHLRTHGEKPFQCKEYGRAFDNTTLIKNFIIPTKPY
WCSKCFSQVSVLTRLQRNHEESYKCSECGKTFSNSTGLTQHQKYCIKAQCGKCGKSSRES
SNLTKFEIQV
Download sequence
Identical sequences ENSPCAP00000000593 ENSPCAP00000000593

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